Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RPL7L1P13-201ENST00000511702 739 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC015795.1-201ENST00000513669 327 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 HIGD1AP6-201ENST00000521833 279 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC023538.1-201ENST00000534576 736 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 SERPINE4P-201ENST00000554978 281 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 SETP1-201ENST00000556014 845 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AADACP1-206ENST00000561502 1193 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AP003973.1-201ENST00000604639 691 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC090948.1-201ENST00000607464 549 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AP005019.3-201ENST00000620418 560 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AC022509.4-201ENST00000621404 572 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 U3.53-201ENST00000628922 216 ntBASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RTFDC1Q9BY42 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 RNU6-1151P-201ENST00000384684 107 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AL590762.2-201ENST00000395798 571 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 ELOCP9-201ENST00000418624 239 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AL136231.1-201ENST00000429407 730 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 USP9YP31-201ENST00000431405 881 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC092393.1-201ENST00000439625 742 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC104689.1-201ENST00000473356 768 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC004263.1-201ENST00000479327 332 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 MTND2P14-201ENST00000482139 351 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 BOLA3P3-201ENST00000505182 232 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC026402.1-201ENST00000513642 170 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 SNORA3.4-201ENST00000515969 96 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 RNA5SP135-201ENST00000517019 125 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 SMARCE1P4-201ENST00000523647 241 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 UBTFL10-201ENST00000528532 562 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 DUXAP5-201ENST00000529668 529 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC068993.1-201ENST00000546724 589 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AGGF1P6-201ENST00000569213 976 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC105227.2-201ENST00000615075 605 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC231759.1-201ENST00000616455 597 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC124312.6-202ENST00000623624 418 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AL731566.1-201ENST00000620490 1937 ntBASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RTFDC1Q9BY42 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 AL451142.2-201ENST00000429076 2090 ntBASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 ZNF876P-202ENST00000398732 1485 ntBASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 AC021146.4-201ENST00000309229 279 ntBASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 RNA5SP187-201ENST00000384400 119 ntBASIC5.73□□□□□ -1.49
RTFDC1Q9BY42 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms