Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC009313.2-201ENST00000417893 1941 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 RNA5SP435-201ENST00000364044 108 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 SNORD113.2-201ENST00000364166 89 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 SNORA11F-201ENST00000408237 128 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 RN7SKP106-201ENST00000410832 272 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 VN1R42P-201ENST00000424651 344 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 RPL23AP4-201ENST00000427757 463 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC022022.1-201ENST00000430304 178 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AL354710.1-201ENST00000453641 246 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC110749.1-201ENST00000462007 357 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 RPL21P71-201ENST00000465598 459 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AL049870.4-201ENST00000555741 486 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC124283.4-201ENST00000581815 456 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 RN7SL690P-201ENST00000582087 240 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC069366.1-201ENST00000583159 838 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 VN1R79P-201ENST00000593540 513 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 SUMO2P14-201ENST00000604488 293 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC010200.2-201ENST00000605098 235 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC093875.1-201ENST00000623688 504 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC008013.2-202ENST00000637965 364 ntBASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC28BQ9BUN5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
CCDC28BQ9BUN5 AC007529.1-201ENST00000418574 2178 ntBASIC4.09□□□□□ -1.76
CCDC28BQ9BUN5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC069282.1-201ENST00000411911 526 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AL590806.1-201ENST00000415818 853 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 RPL7AP25-201ENST00000423357 805 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 VDAC1P6-201ENST00000430062 855 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 MTCYBP21-201ENST00000443300 1113 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 RPL36AP15-201ENST00000444514 266 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 RPL6P5-201ENST00000445678 828 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 MTCO3P20-201ENST00000454926 688 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC008379.1-201ENST00000463655 464 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC010307.1-201ENST00000467206 836 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 RPL31P61-201ENST00000496160 376 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC021146.1-201ENST00000511202 716 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 SCARNA1-201ENST00000517138 166 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AP003355.1-201ENST00000518956 587 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 HAUS1P3-201ENST00000523909 662 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC104229.1-201ENST00000561364 255 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC069061.3-201ENST00000582254 823 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 MRPS35P3-201ENST00000603189 709 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC026790.2-201ENST00000606282 430 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AF129408.1-201ENST00000608767 431 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AC100847.1-201ENST00000611316 481 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 AL049536.1-201ENST00000625043 744 ntBASIC4.08□□□□□ -1.76
CCDC28BQ9BUN5 CASC19-261ENST00000641853 1638 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms