Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC090281.1-201ENST00000523019 276 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 CIR1P1-201ENST00000524055 1133 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC063949.1-201ENST00000552900 865 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC068446.3-201ENST00000555285 382 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 MRPS35P3-201ENST00000603189 709 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC079880.2-201ENST00000603790 1213 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 RPL21P136-201ENST00000605378 396 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC005972.3-201ENST00000606304 481 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 MIR486-1-201ENST00000612171 68 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 uc_338.9-201ENST00000617424 182 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 MIR7151-201ENST00000617477 60 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL163051.2-201ENST00000618976 735 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL445437.1-201ENST00000623157 3087 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 SNORA40.4-201ENST00000390971 128 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RNU6-796P-201ENST00000391086 107 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 CYB5AP4-201ENST00000396692 399 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RNU2-72P-201ENST00000411175 163 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 MTND4P11-201ENST00000417020 1058 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC048351.1-201ENST00000420064 602 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC234779.1-201ENST00000425910 285 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL732292.1-201ENST00000426692 226 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL512661.1-201ENST00000434586 1253 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RPS20P1-201ENST00000434853 354 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RPL34P26-201ENST00000445636 354 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 HMGB1P16-201ENST00000447155 540 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 CYCSP53-201ENST00000455540 265 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RN7SL610P-201ENST00000463845 291 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RPL7P1-201ENST00000468161 747 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RPL7P9-201ENST00000468715 747 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 RPL23AP2-201ENST00000471227 466 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC108475.1-201ENST00000507880 950 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC106806.2-201ENST00000509365 500 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC133963.2-201ENST00000513686 578 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 IGKV2D-10-201ENST00000520194 281 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC020914.4-201ENST00000597690 277 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 HMGB1P50-201ENST00000605814 607 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 MIR7973-1-201ENST00000614683 76 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL121873.1-201ENST00000616013 524 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC124312.6-202ENST00000623624 418 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC010300.1-201ENST00000600671 5134 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AL451142.2-201ENST00000429076 2090 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC083899.2-201ENST00000423285 1376 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 IPO8P1-201ENST00000455509 3109 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 AC006504.1-201ENST00000562493 3666 ntBASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HDHD3Q9BSH5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms