Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ABCA3Q99758 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCA3Q99758 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCA3Q99758 MAPRE1P3-201ENST00000435438 796 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.83□□□□□ -1.64
ABCA3Q99758 ARL4AP3-201ENST00000441452 574 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AC108941.1-201ENST00000502853 530 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCA3Q99758 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCA3Q99758 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ABCA3Q99758 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCA3Q99758 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
ABCA3Q99758 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ABCA3Q99758 AC093535.2-201ENST00000624769 2326 ntBASIC4.82□□□□□ -1.64
ABCA3Q99758 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.82□□□□□ -1.64
ABCA3Q99758 AC006116.10-201ENST00000591836 581 ntBASIC4.82□□□□□ -1.64
ABCA3Q99758 CKS1BP3-201ENST00000600888 237 ntBASIC4.82□□□□□ -1.64
ABCA3Q99758 MTCO3P22-201ENST00000603219 784 ntBASIC4.82□□□□□ -1.64
ABCA3Q99758 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ABCA3Q99758 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCA3Q99758 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ABCA3Q99758 AC020633.1-201ENST00000468439 2247 ntBASIC4.82□□□□□ -1.64
ABCA3Q99758 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCA3Q99758 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 NACA3P-201ENST00000359690 648 ntBASIC4.81□□□□□ -1.64
ABCA3Q99758 NPM1P25-201ENST00000429734 854 ntBASIC4.81□□□□□ -1.64
ABCA3Q99758 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCA3Q99758 VN1R25P-201ENST00000443385 738 ntBASIC4.81□□□□□ -1.64
ABCA3Q99758 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.81□□□□□ -1.64
ABCA3Q99758 AC010655.1-201ENST00000449336 292 ntBASIC4.81□□□□□ -1.64
ABCA3Q99758 VN1R40P-201ENST00000455196 941 ntBASIC4.81□□□□□ -1.64
ABCA3Q99758 TMED11P-201ENST00000479478 690 ntBASIC4.81□□□□□ -1.64
ABCA3Q99758 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.81□□□□□ -1.64
ABCA3Q99758 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.81□□□□□ -1.64
ABCA3Q99758 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ABCA3Q99758 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ABCA3Q99758 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCA3Q99758 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.81□□□□□ -1.64
ABCA3Q99758 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ABCA3Q99758 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.81□□□□□ -1.64
ABCA3Q99758 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ABCA3Q99758 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ABCA3Q99758 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ABCA3Q99758 MTND4LP20-201ENST00000402379 270 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCA3Q99758 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 SDCBPP2-201ENST00000424643 885 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 RNF19BPX-201ENST00000426224 625 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCA3Q99758 UBA52P3-201ENST00000491303 382 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 UBTFL9-201ENST00000534504 1148 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 AC007066.2-202ENST00000566531 914 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AC110801.1-201ENST00000623590 212 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AC127502.3-201ENST00000636170 1206 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCA3Q99758 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 MFSD8-233ENST00000641482 4860 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ABCA3Q99758 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
ABCA3Q99758 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 AC007685.1-201ENST00000329806 452 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 BX323014.1-201ENST00000412876 237 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ABCA3Q99758 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCA3Q99758 RPL7P28-201ENST00000437739 740 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCA3Q99758 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
ABCA3Q99758 RN7SL429P-201ENST00000479090 223 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 RN7SL489P-201ENST00000486185 223 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 RN7SL327P-201ENST00000488659 223 ntBASIC4.8□□□□□ -1.64
ABCA3Q99758 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCA3Q99758 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.8□□□□□ -1.64
ABCA3Q99758 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.8□□□□□ -1.64
ABCA3Q99758 KC877982.1-201ENST00000602313 470 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms