Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MTND1P12-201ENST00000455231 147 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 PPP1R2P5-201ENST00000457256 603 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 RPS20P4-201ENST00000461659 355 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 RN7SL326P-201ENST00000477493 296 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 RN7SL714P-201ENST00000487050 298 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 RN7SL193P-201ENST00000491708 276 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 Y_RNA.668-201ENST00000516233 93 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 RPL21P5-201ENST00000554662 472 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 NRBF2P1-201ENST00000587407 859 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC087763.1-201ENST00000603391 286 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC211433.2-201ENST00000608433 387 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AL355810.1-201ENST00000614629 552 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC104010.1-201ENST00000616889 150 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AC010329.1-201ENST00000593903 8328 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 VN2R3P-201ENST00000422626 1412 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AL157831.2-201ENST00000564681 3095 ntBASIC7.24□□□□□ -1.25
TRIM47Q96LD4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM47Q96LD4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 OR1S2-201ENST00000302592 978 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 OR10R3P-201ENST00000361688 942 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 U8.3-201ENST00000363321 132 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 RNU6-723P-201ENST00000383973 107 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 MIR105-2-201ENST00000385083 81 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 RN7SKP121-201ENST00000410842 305 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 SEPT7P5-201ENST00000434048 306 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AL512605.1-202ENST00000441919 381 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 KCTD9P2-201ENST00000512203 1013 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 RNA5SP362-201ENST00000516048 118 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 RN7SKP295-201ENST00000517264 153 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 OR5D15P-201ENST00000531671 942 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC090651.1-201ENST00000567865 634 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC136618.2-201ENST00000575091 400 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 MIR1273E-201ENST00000581165 102 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 PRELID3BP8-201ENST00000604148 295 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AL592436.1-201ENST00000605135 558 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC062037.2-201ENST00000610137 73 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 TCL6_3.1-201ENST00000619064 137 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AL359976.1-201ENST00000418655 3528 ntBASIC7.23□□□□□ -1.25
TRIM47Q96LD4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM47Q96LD4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 OR52B5P-204ENST00000641744 3467 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 Y_RNA.159-201ENST00000363674 87 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM47Q96LD4 MTCYBP4-201ENST00000401524 249 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 NPM1P38-201ENST00000403835 865 ntBASIC7.22□□□□□ -1.25
TRIM47Q96LD4 AL121834.1-202ENST00000404494 277 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms