Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC008837.2-201ENST00000513076 418 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AF186190.1-201ENST00000517470 480 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AP001317.1-201ENST00000531194 960 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AL049839.1-201ENST00000556151 657 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC087465.1-201ENST00000560574 245 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC044860.2-201ENST00000561005 179 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 MIR4472-2-201ENST00000582069 67 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC123768.4-201ENST00000616244 701 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AC009704.2-201ENST00000618739 483 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AL731532.2-201ENST00000623542 1953 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 CYP1D1P-201ENST00000416662 1433 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 AL355852.1-201ENST00000454081 1771 ntBASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP3Q96JB5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDK5RAP3Q96JB5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDK5RAP3Q96JB5 AL118496.1-201ENST00000440201 1812 ntBASIC5.46□□□□□ -1.53
CDK5RAP3Q96JB5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC093535.2-201ENST00000624769 2326 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 HMGB1P5-201ENST00000255320 642 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 RNU6-560P-201ENST00000364007 108 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL589647.1-201ENST00000402485 466 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 OR51A3P-201ENST00000413596 924 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC006960.1-201ENST00000419980 153 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 DPRXP1-201ENST00000426312 460 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC093414.1-201ENST00000434712 514 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL133217.1-201ENST00000450980 425 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC015724.1-201ENST00000478577 156 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC090686.1-201ENST00000481577 749 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 UBA52P3-201ENST00000491303 382 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC117522.2-201ENST00000510049 657 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 MRPS33P3-201ENST00000513456 322 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 Y_RNA.688-201ENST00000516565 95 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 RNU6-709P-201ENST00000517257 104 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL132657.2-201ENST00000564417 358 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC016180.1-201ENST00000567945 403 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL109653.1-201ENST00000603091 248 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC013244.1-201ENST00000604279 193 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC069545.1-201ENST00000605671 358 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC010424.2-201ENST00000607594 443 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC211433.2-201ENST00000608433 387 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AL360219.1-201ENST00000610230 366 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC009318.3-201ENST00000616916 503 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC068870.2-201ENST00000620635 389 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC067852.7-201ENST00000623270 535 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AP000676.3-201ENST00000623299 569 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 INTS6P1-201ENST00000504674 2530 ntBASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP3Q96JB5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC139713.2-215ENST00000641428 5037 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 CASC19-204ENST00000641001 2055 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 RNA5SP345-201ENST00000410646 108 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms