Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MIR4458-201ENST00000578872 75 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AP000919.1-202ENST00000581139 1264 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC067852.4-201ENST00000590314 478 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 VN1R79P-201ENST00000593540 513 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC011487.3-201ENST00000593607 453 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC005191.1-201ENST00000603950 358 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 MIR6864-201ENST00000617935 70 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 NCLP2-201ENST00000416078 1462 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AL442639.1-201ENST00000625030 1899 ntBASIC4.03□□□□□ -1.77
RFT1Q96AA3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 MARK2P15-201ENST00000432204 2186 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 XPOTP1-201ENST00000443317 2398 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 SNORA51.1-201ENST00000363243 140 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 RNA5SP123-201ENST00000363244 119 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 MIR765-201ENST00000390226 114 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL355143.1-201ENST00000407101 841 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC114755.2-201ENST00000413520 361 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 PRELID3BP11-201ENST00000414230 479 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC007394.1-201ENST00000421941 531 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 RPL23AP25-201ENST00000430973 463 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL451050.1-201ENST00000450126 415 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 OR5H4P-201ENST00000510851 923 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC110775.1-201ENST00000513721 462 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL161713.1-201ENST00000555538 145 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 VN1R87P-201ENST00000596706 487 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 BNIP3P27-201ENST00000599991 412 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC091488.1-201ENST00000604239 660 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC020634.1-201ENST00000608701 549 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC124016.2-201ENST00000610058 665 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL512427.1-201ENST00000618593 349 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC091905.4-201ENST00000623432 202 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC126544.2-201ENST00000625174 749 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 BX649567.1-201ENST00000642071 1134 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 AC095050.2-201ENST00000510748 1458 ntBASIC4.02□□□□□ -1.77
RFT1Q96AA3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
RFT1Q96AA3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFT1Q96AA3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFT1Q96AA3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 AL136964.1-201ENST00000622038 2990 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFT1Q96AA3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFT1Q96AA3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFT1Q96AA3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 RNU6-1151P-201ENST00000384684 107 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 AC092638.1-201ENST00000411966 1275 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 RPL7P53-201ENST00000421245 739 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 EXTL2P1-201ENST00000446218 416 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 AC016724.1-201ENST00000453215 421 ntBASIC4.01□□□□□ -1.77
RFT1Q96AA3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.01□□□□□ -1.77
RFT1Q96AA3 AURKAPS2-201ENST00000454983 333 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms