Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.37□□□□□ -1.87
USP9XQ93008 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.37□□□□□ -1.87
USP9XQ93008 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.37□□□□□ -1.87
USP9XQ93008 CYCSP28-201ENST00000534284 321 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
USP9XQ93008 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.37□□□□□ -1.87
USP9XQ93008 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.37□□□□□ -1.87
USP9XQ93008 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP9XQ93008 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP9XQ93008 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 AC005831.1-201ENST00000624384 1697 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 Y_RNA.796-201ENST00000364268 102 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 Y_RNA.799-201ENST00000364992 102 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.37□□□□□ -1.87
USP9XQ93008 SNORA70B-201ENST00000384210 135 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 RNU6-729P-201ENST00000384399 107 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USP9XQ93008 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 AL035407.1-201ENST00000429211 571 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.37□□□□□ -1.87
USP9XQ93008 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.37□□□□□ -1.87
USP9XQ93008 AC138409.2-202ENST00000507274 458 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.37□□□□□ -1.87
USP9XQ93008 AC138393.1-206ENST00000540997 1886 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 AL353726.1-201ENST00000614041 1000 ntBASIC3.37□□□□□ -1.87
USP9XQ93008 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
USP9XQ93008 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP9XQ93008 AP002001.2-201ENST00000529025 1469 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP9XQ93008 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP9XQ93008 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP9XQ93008 SNORA9.2-201ENST00000365361 133 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 SEPT7P2-202ENST00000398921 823 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 GNG5P5-201ENST00000420444 220 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 RPL7P12-201ENST00000446719 750 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AC005002.1-201ENST00000447458 540 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AC133552.5-201ENST00000604266 540 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 HSPA8P4-201ENST00000511877 1920 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.36□□□□□ -1.87
USP9XQ93008 AP001273.1-201ENST00000624493 3152 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
USP9XQ93008 RPL5P18-201ENST00000406671 891 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AL121878.1-201ENST00000418638 859 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 Z97055.1-201ENST00000419730 712 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 RPS15AP29-201ENST00000445539 400 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
USP9XQ93008 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.36□□□□□ -1.87
USP9XQ93008 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.36□□□□□ -1.87
USP9XQ93008 AP001992.1-205ENST00000462248 379 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP9XQ93008 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP9XQ93008 MIR4660-201ENST00000583549 74 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AC079684.1-201ENST00000621405 437 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 AP003485.2-201ENST00000623636 610 ntBASIC3.36□□□□□ -1.87
USP9XQ93008 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.36□□□□□ -1.87
USP9XQ93008 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
USP9XQ93008 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
USP9XQ93008 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP9XQ93008 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 SNORA5.1-201ENST00000384275 131 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RNU11-201ENST00000387069 134 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.35□□□□□ -1.87
USP9XQ93008 MIR1911-201ENST00000410783 80 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RBMY1KP-201ENST00000423480 476 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RPL23AP12-201ENST00000467573 473 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RPS17P11-201ENST00000474297 293 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 AC006517.1-201ENST00000480485 328 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RN7SL432P-201ENST00000484057 298 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 VN1R104P-201ENST00000505115 1009 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.35□□□□□ -1.87
USP9XQ93008 RNU1-41P-201ENST00000516161 162 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RNU1-48P-201ENST00000516400 162 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 RNA5SP164-201ENST00000516533 110 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 AC022695.1-201ENST00000522089 237 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.35□□□□□ -1.87
USP9XQ93008 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.35□□□□□ -1.87
USP9XQ93008 AL360012.1-201ENST00000602813 131 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 AL392088.2-201ENST00000637607 285 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 AC119674.1-207ENST00000641355 633 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
USP9XQ93008 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.35□□□□□ -1.87
USP9XQ93008 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP9XQ93008 RN7SKP97-201ENST00000410966 333 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.35□□□□□ -1.87
USP9XQ93008 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.35□□□□□ -1.87
USP9XQ93008 TRBV12-1-201ENST00000479785 344 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms