Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LMO3Q8TAP4 AL390862.1-201ENST00000635467 1469 ntBASIC4.6□□□□□ -1.67
LMO3Q8TAP4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO3Q8TAP4 AL158163.1-201ENST00000603915 1649 ntBASIC4.6□□□□□ -1.67
LMO3Q8TAP4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
LMO3Q8TAP4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 SNORD56.4-201ENST00000363883 71 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RNU1-132P-201ENST00000364300 164 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RNU6-1251P-201ENST00000364502 107 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AL161631.1-201ENST00000417933 486 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 HMGB1P49-201ENST00000418882 569 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 EIF1P3-201ENST00000423841 334 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RPP40P1-201ENST00000426762 456 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 ATP5C1P1-201ENST00000441945 895 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 PTGES3P5-201ENST00000455109 434 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RPL6P9-201ENST00000466502 859 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RN7SL738P-201ENST00000470264 297 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RAP1BP2-201ENST00000478270 544 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RNA5SP49-201ENST00000516450 115 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 RNA5SP360-201ENST00000516555 118 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 CDH12P4-201ENST00000517835 295 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 CDH12P3-201ENST00000517935 295 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 CDH12P1-201ENST00000518435 295 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AP003717.3-201ENST00000544832 1180 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC090515.3-201ENST00000560431 315 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 CYP4A43P-201ENST00000568156 121 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AP005136.1-201ENST00000579765 429 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AL356218.2-201ENST00000605264 187 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC096586.1-201ENST00000610267 561 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC092106.3-201ENST00000611308 722 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AL121873.1-201ENST00000616013 524 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 AP002782.1-201ENST00000623107 614 ntBASIC4.59□□□□□ -1.67
LMO3Q8TAP4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LMO3Q8TAP4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.59□□□□□ -1.68
LMO3Q8TAP4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LMO3Q8TAP4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LMO3Q8TAP4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RNU1-14P-201ENST00000362759 152 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RNU5B-1-201ENST00000363286 116 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RNU4-68P-201ENST00000364314 141 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RNU6-1005P-201ENST00000384519 107 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RNU6-1242P-201ENST00000391052 103 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RPS4XP9-201ENST00000405151 780 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AC008173.1-201ENST00000418901 264 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AL513175.2-201ENST00000422071 443 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 EIF4EP1-201ENST00000422311 642 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AC245028.1-201ENST00000423259 256 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 MTCYBP12-201ENST00000440559 1134 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 CEACAMP9-201ENST00000442990 513 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 Z95152.1-201ENST00000453556 656 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AC006499.6-201ENST00000511169 607 ntBASIC4.58□□□□□ -1.68
LMO3Q8TAP4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.58□□□□□ -1.68
LMO3Q8TAP4 OR8I1P-201ENST00000529291 931 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms