Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CYP2C60P-201ENST00000566088 139 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 MIR4277-201ENST00000578298 84 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC090181.2-201ENST00000602975 672 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AL135786.2-201ENST00000608422 615 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 MIR6133-201ENST00000617057 108 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC068831.8-201ENST00000620171 435 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC099654.13-201ENST00000639774 207 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC087359.1-201ENST00000508335 1740 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AL355852.1-201ENST00000454081 1771 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AP005901.5-201ENST00000545779 1796 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 NAMPTP1-201ENST00000440465 2514 ntBASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A3Q8N4M1 AC138393.1-206ENST00000540997 1886 ntBASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 AP001029.2-203ENST00000589795 4910 ntBASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SLC44A3Q8N4M1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL672167.2-201ENST00000377164 879 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 Y_RNA.516-201ENST00000384541 124 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 U3.22-201ENST00000391120 215 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC093719.1-202ENST00000392735 373 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL049693.1-201ENST00000402760 611 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL121878.1-201ENST00000418638 859 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL139421.1-201ENST00000423010 169 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 YWHAEP5-201ENST00000431545 765 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 GTF2IP7-202ENST00000436677 309 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC092641.1-201ENST00000440229 772 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 SLC25A18P1-201ENST00000449385 454 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 TPMTP4-201ENST00000450749 678 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 GAPDHP36-201ENST00000480688 918 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 RPS24P16-201ENST00000497294 392 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC079140.3-201ENST00000511111 550 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC008837.2-201ENST00000513076 418 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL049870.4-201ENST00000555741 486 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 MIR4715-201ENST00000584117 79 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AL020997.2-201ENST00000602607 184 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AP001596.2-201ENST00000608410 312 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC109347.2-201ENST00000610220 349 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC138965.3-201ENST00000623875 498 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AC024023.1-201ENST00000624530 922 ntBASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SLC44A3Q8N4M1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 DHX40P1-201ENST00000588725 1412 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 OR4K15-201ENST00000305051 1216 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 AL672167.1-206ENST00000356293 943 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-931P-201ENST00000363850 107 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-707P-201ENST00000364647 95 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-1283P-201ENST00000365314 105 ntBASIC5.14□□□□□ -1.59
SLC44A3Q8N4M1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms