Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 OR2AS1P-201ENST00000427827 319 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 BRWD1P3-201ENST00000428816 390 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC073900.1-201ENST00000429766 776 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 SDHCP3-201ENST00000445371 506 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 EEF1A1P1-201ENST00000447052 739 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC243772.1-201ENST00000451620 410 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 SNORA35.1-201ENST00000458908 128 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 snoU13.7-201ENST00000459220 104 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 PFN1P6-201ENST00000476786 399 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 FTH1P24-201ENST00000503502 462 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 RN7SKP99-201ENST00000517028 307 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC080078.3-201ENST00000605407 463 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC120057.5-201ENST00000623840 154 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC243725.1-201ENST00000637164 436 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC007159.1-201ENST00000566529 4706 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC091046.3-201ENST00000631455 1574 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-254P-201ENST00000363377 107 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RNU6-511P-201ENST00000363496 107 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RN7SKP107-201ENST00000364157 290 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.339-201ENST00000365325 102 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 SNORD82-201ENST00000365530 70 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.373-201ENST00000365600 103 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RNY4P36-201ENST00000391116 96 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 PSMA6P1-201ENST00000400275 741 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC009362.1-201ENST00000427253 406 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RPS7P3-201ENST00000443360 580 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 VN1R17P-201ENST00000472048 1090 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RPL7AP30-201ENST00000482859 796 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RFPL4AP5-201ENST00000514977 504 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 RNU7-51P-201ENST00000516560 62 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 IGKV1D-32-201ENST00000517449 318 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 NDUFA3P2-201ENST00000531434 232 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL163153.1-201ENST00000554223 283 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC090651.1-201ENST00000567865 634 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL589765.5-201ENST00000596133 515 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC006924.1-201ENST00000610750 559 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AC084781.2-201ENST00000615568 161 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL049794.2-201ENST00000616301 365 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 AL078596.1-201ENST00000624856 447 ntBASIC6.4□□□□□ -1.38
DEPDC4Q8N2C3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
DEPDC4Q8N2C3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms