Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 RPL5P13-201ENST00000462840 709 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 RPL6P9-201ENST00000466502 859 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MIR2116-201ENST00000517221 80 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 RPL12P22-201ENST00000519073 490 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 MRPL49P2-201ENST00000521066 465 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 HMGB1P1-201ENST00000522557 636 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 OR8I1P-201ENST00000529291 931 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC106734.1-201ENST00000568646 663 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL021997.1-201ENST00000605757 193 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC020634.1-201ENST00000608701 549 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AC245100.7-201ENST00000609678 442 ntBASIC5.72□□□□□ -1.49
SYNE4Q8N205 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE4Q8N205 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE4Q8N205 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE4Q8N205 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE4Q8N205 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SYNE4Q8N205 AC025263.3-201ENST00000622965 1396 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE4Q8N205 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC100778.3-201ENST00000580060 1750 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 Y_RNA.194-201ENST00000363985 102 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE4Q8N205 SNORA5.1-201ENST00000384275 131 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 RNU6-83P-201ENST00000384568 112 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 ATP5F1P3-201ENST00000397213 657 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AL445213.1-201ENST00000412589 747 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC011933.1-201ENST00000413334 321 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 OR4C10P-201ENST00000434991 931 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 NMNAT1P2-201ENST00000435192 860 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 ISCA1P2-201ENST00000438679 421 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 FGF7P5-201ENST00000441829 291 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 CYCSP24-201ENST00000445119 316 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 RNU7-125P-201ENST00000458760 62 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC116533.1-201ENST00000459748 321 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC105137.1-201ENST00000484355 562 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC091860.1-201ENST00000505723 432 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AP000827.1-201ENST00000527814 258 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC087897.1-201ENST00000550134 156 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 PSMB7P1-201ENST00000556349 514 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 IPO5P1-202ENST00000600039 287 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC091979.2-201ENST00000607514 214 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC005332.10-201ENST00000612725 619 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC034229.5-201ENST00000624258 185 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC092159.4-201ENST00000624944 550 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE4Q8N205 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE4Q8N205 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 AL445487.1-201ENST00000415694 1580 ntBASIC5.71□□□□□ -1.5
SYNE4Q8N205 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNE4Q8N205 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE4Q8N205 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE4Q8N205 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE4Q8N205 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
SYNE4Q8N205 MIR670-201ENST00000390142 98 ntBASIC5.7□□□□□ -1.5
SYNE4Q8N205 RPS26P8-201ENST00000393490 348 ntBASIC5.7□□□□□ -1.5
SYNE4Q8N205 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNE4Q8N205 AL356320.2-201ENST00000417263 507 ntBASIC5.7□□□□□ -1.5
SYNE4Q8N205 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms