Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC068287.1-201ENST00000430283 295 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 MRPL35P4-201ENST00000453682 566 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AL356981.1-201ENST00000454879 684 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC096992.1-201ENST00000459808 709 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 MTCO2P6-201ENST00000463134 685 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 GAPDHP39-201ENST00000481866 979 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 RNA5SP249-201ENST00000516127 99 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 RN7SKP92-201ENST00000517266 244 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC139103.1-201ENST00000534696 1030 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC023050.2-201ENST00000544968 387 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 OR4U1P-201ENST00000554958 912 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC093249.4-201ENST00000564755 259 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC245036.5-201ENST00000596330 847 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 GAS5-AS1-201ENST00000602767 694 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC025588.2-201ENST00000604851 466 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 Z99289.3-201ENST00000605586 594 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC021755.4-201ENST00000616620 456 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AL355493.4-201ENST00000618530 292 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 MIR6810-201ENST00000622701 70 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AP002967.1-201ENST00000624203 539 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 CR392039.4-201ENST00000624968 501 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 SMG1P6-201ENST00000532337 2930 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
BEST3Q8N1M1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BEST3Q8N1M1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 SNORA40.2-201ENST00000390847 128 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 RNU6-1242P-201ENST00000391052 103 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC093719.1-202ENST00000392735 373 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL049697.2-201ENST00000403708 294 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 FCF1P5-201ENST00000406490 482 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 RNU2-65P-201ENST00000410162 185 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 ATG4AP1-201ENST00000416893 538 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 CETN4P-201ENST00000432407 469 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL451139.1-201ENST00000434718 346 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 MTND1P31-201ENST00000449206 961 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 RNA5SP464-201ENST00000516251 108 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 HMGB1P19-201ENST00000517578 577 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 MTCO2P15-201ENST00000532655 656 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC090695.1-201ENST00000561269 1222 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC023813.2-201ENST00000564321 469 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 NIFKP6-201ENST00000598115 845 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 ELOCP35-201ENST00000604289 336 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC010200.2-201ENST00000605098 235 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL392112.1-201ENST00000605115 829 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AP005137.2-201ENST00000609238 400 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC019193.2-201ENST00000610012 634 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC097505.1-201ENST00000610199 565 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AL121890.2-201ENST00000617644 465 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
BEST3Q8N1M1 AC134882.1-201ENST00000603738 1676 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 MTND4P8-201ENST00000514997 1362 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.38□□□□□ -1.71
BEST3Q8N1M1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.37□□□□□ -1.71
BEST3Q8N1M1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BEST3Q8N1M1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms