Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 MIR383-201ENST00000362257 73 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RNU1-18P-201ENST00000363062 164 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RPS4XP9-201ENST00000405151 780 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RPL37P18-201ENST00000411602 243 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL450992.3-201ENST00000413192 568 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RPS27AP7-201ENST00000422792 455 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 DNAJC19P7-201ENST00000428811 344 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL358472.1-201ENST00000431295 329 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL606490.7-201ENST00000433136 191 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RPL7P1-201ENST00000468161 747 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RPL7P9-201ENST00000468715 747 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 RPS29P22-201ENST00000472363 168 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AC041039.1-201ENST00000485656 536 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 HMGB1P47-201ENST00000511281 589 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AC099522.1-202ENST00000514718 367 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AC067805.1-201ENST00000559344 470 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 MIR5684-201ENST00000585074 65 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 MRPS35P3-201ENST00000603189 709 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL356218.2-201ENST00000605264 187 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AC084036.1-201ENST00000609190 508 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AL121890.3-201ENST00000618494 516 ntBASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC50Q8IVM0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC106871.1-201ENST00000568324 3102 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AL161909.1-201ENST00000397390 712 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 MIR1251-201ENST00000408552 70 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 RPL23AP26-201ENST00000412728 464 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 RPL30P2-201ENST00000414021 291 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 RPL23AP38-201ENST00000423801 469 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 MTCO3P21-201ENST00000430791 643 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 BTF3P10-201ENST00000433415 495 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC096638.2-201ENST00000434965 711 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC245517.2-201ENST00000442890 346 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC005229.2-201ENST00000456995 399 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 RN7SL481P-201ENST00000477764 299 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC005912.1-201ENST00000495392 255 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 HPRT1P2-201ENST00000505250 544 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC016550.3-201ENST00000515706 767 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 SNORA48.9-201ENST00000516419 162 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC022884.3-201ENST00000579571 248 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 MIR4443-201ENST00000585052 53 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 IPO5P1-202ENST00000600039 287 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC012557.1-201ENST00000607115 611 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC114781.5-201ENST00000615297 108 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC016957.2-201ENST00000616998 848 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 PHKBP1-201ENST00000450951 1951 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 AC092079.1-201ENST00000558620 1985 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CCDC50Q8IVM0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 SNORA60-201ENST00000362396 134 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 RN7SKP44-201ENST00000363602 316 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 RNA5SP366-201ENST00000365454 123 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 CEACAMP9-201ENST00000442990 513 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 MTCO3P16-201ENST00000454456 754 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 RPL38P1-201ENST00000460914 211 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 PPIAP21-201ENST00000464473 501 ntBASIC4.22□□□□□ -1.73
CCDC50Q8IVM0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms