Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 AC010300.1-201ENST00000600671 5134 ntBASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 AP001148.1-201ENST00000624124 2359 ntBASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MRPL55Q7Z7F7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 U8.4-201ENST00000363626 134 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RNU4-4P-201ENST00000364588 130 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RNA5SP189-201ENST00000364920 115 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RNU6-171P-201ENST00000384354 107 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL589647.1-201ENST00000402485 466 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL138878.1-201ENST00000405131 347 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 ZNF603P-201ENST00000405613 487 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 SNORA11.3-201ENST00000408471 128 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RN7SKP213-201ENST00000410746 298 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 VDAC1P9-201ENST00000412766 841 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 MTCYBP24-201ENST00000420387 1106 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL159169.1-201ENST00000421119 127 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL606495.1-201ENST00000422100 813 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 PDSS1P1-201ENST00000422953 1114 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL009174.1-201ENST00000426577 416 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RPL7P11-201ENST00000437586 658 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 CYCSP43-201ENST00000438233 310 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC092170.1-201ENST00000440211 356 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 Z80107.2-201ENST00000445127 392 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC005002.1-201ENST00000447458 540 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 OR52J1P-201ENST00000450596 932 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC016724.1-201ENST00000453215 421 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 CFTRP1-201ENST00000456646 183 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RPL23AP56-201ENST00000460778 453 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 PRDX3P4-201ENST00000470828 747 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RN7SL41P-201ENST00000476144 297 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RPL31P13-201ENST00000484151 370 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 HMGB1P38-201ENST00000490557 577 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC104971.1-201ENST00000495117 578 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RPS4XP18-201ENST00000495480 763 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RPL7P47-201ENST00000497299 556 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RNA5SP154-201ENST00000516193 111 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RNA5SP92-201ENST00000516437 110 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RNA5SP34-201ENST00000516887 130 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AP003717.3-201ENST00000544832 1180 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RPL21P7-201ENST00000557463 483 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 MIR4489-201ENST00000578869 62 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC005412.1-201ENST00000580812 1049 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 RN7SL622P-201ENST00000585292 275 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC011487.3-201ENST00000593607 453 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC090181.2-201ENST00000602975 672 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC008638.3-201ENST00000603341 463 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC020910.3-201ENST00000603701 874 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC016542.1-201ENST00000608259 493 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC007497.1-201ENST00000610421 561 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 FAM27B-201ENST00000610601 213 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 SNORA11.6-201ENST00000619030 128 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AC091905.4-201ENST00000623432 202 ntBASIC3.01□□□□□ -1.93
MRPL55Q7Z7F7 AP002799.1-201ENST00000623552 423 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms