Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC048346.1-201ENST00000510247 144 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC116353.3-201ENST00000511215 249 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 RNU6-709P-201ENST00000517257 104 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC087808.1-201ENST00000520501 361 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AL390816.3-201ENST00000604527 1066 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AP003973.1-201ENST00000604639 691 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC010200.2-201ENST00000605098 235 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AL451074.6-201ENST00000608512 729 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC005086.4-201ENST00000623065 213 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 AL353662.3-201ENST00000625131 237 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 MIR4278-201ENST00000636094 69 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 OR2L1P-202ENST00000641567 1023 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AP000776.1-201ENST00000530032 1663 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHFQ7M4L6 AC008758.3-201ENST00000507003 1829 ntBASIC4.34□□□□□ -1.71
SHFQ7M4L6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHFQ7M4L6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
SHFQ7M4L6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.34□□□□□ -1.72
SHFQ7M4L6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHFQ7M4L6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHFQ7M4L6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SHFQ7M4L6 AC092435.4-201ENST00000623012 4159 ntBASIC4.34□□□□□ -1.72
SHFQ7M4L6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHFQ7M4L6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL353743.4-201ENST00000422653 1547 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC109315.1-201ENST00000584143 1347 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 FAM3C2-201ENST00000312214 681 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 Y_RNA.408-201ENST00000383987 102 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL080315.1-201ENST00000406055 466 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 RNU6-757P-201ENST00000410334 100 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 MRPS36P1-201ENST00000421291 307 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ATP5F1P1-201ENST00000433775 569 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL451139.1-201ENST00000434718 346 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ELOCP10-201ENST00000440624 327 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ARL4AP3-201ENST00000441452 574 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL354710.1-201ENST00000453641 246 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL133477.1-201ENST00000457472 514 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 RN7SL97P-201ENST00000486780 299 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC011352.3-201ENST00000505162 593 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 STMN1P2-201ENST00000508435 439 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC087373.1-201ENST00000524920 491 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL049839.1-201ENST00000556151 657 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC079075.1-201ENST00000559543 878 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL132657.2-201ENST00000564417 358 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC093249.4-201ENST00000564755 259 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AL109653.1-201ENST00000603091 248 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 Z94722.1-201ENST00000604328 474 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 ELOCP34-201ENST00000604436 327 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 CR392039.4-201ENST00000624968 501 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 AP003399.1-201ENST00000637534 361 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC103706.2-201ENST00000638080 240 ntBASIC4.33□□□□□ -1.72
SHFQ7M4L6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms