Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 MTND4P26-201ENST00000415971 1359 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC138393.1-206ENST00000540997 1886 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 RNU6-792P-201ENST00000363490 107 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 SNORD74.4-201ENST00000364129 80 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 PRELID3BP11-201ENST00000414230 479 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 TMSB10P2-201ENST00000416049 131 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 RPS12P23-201ENST00000419579 400 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC073310.1-201ENST00000423226 1033 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AL353748.1-201ENST00000440753 474 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC092809.1-201ENST00000441469 474 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 CEACAMP9-201ENST00000442990 513 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 HMGB1P48-201ENST00000446155 598 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 snoU13.1-201ENST00000459157 104 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC010374.1-201ENST00000503762 1237 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC090071.1-201ENST00000507713 644 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC005351.1-201ENST00000511152 786 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AP003168.1-201ENST00000530091 307 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC104229.1-201ENST00000561364 255 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AP001180.3-201ENST00000582221 145 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 MIR4715-201ENST00000584117 79 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AP003117.2-201ENST00000606010 545 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 MIR432-201ENST00000606207 94 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 MIR6864-201ENST00000617935 70 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AL163051.2-201ENST00000618976 735 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 AC073569.3-201ENST00000619055 682 ntBASIC3.93□□□□□ -1.78
NIPAL3Q6P499 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NIPAL3Q6P499 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 RNU1-130P-201ENST00000363930 160 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 U3.15-201ENST00000365398 212 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AL356387.2-201ENST00000422272 243 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC008065.1-201ENST00000428525 348 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 ELOCP6-201ENST00000429066 328 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC068287.1-201ENST00000430283 295 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC114495.1-201ENST00000441274 436 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 ELOCP12-201ENST00000458706 328 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC104689.1-201ENST00000473356 768 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC104108.1-201ENST00000509930 412 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 UBTFL9-201ENST00000534504 1148 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AL352979.3-201ENST00000553515 247 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AL442163.2-201ENST00000553912 710 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 ATP5F1P7-201ENST00000567330 760 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AL139395.1-201ENST00000603662 160 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AL162574.2-201ENST00000614618 657 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 FRG1HP-204ENST00000617940 757 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC017104.5-201ENST00000637647 639 ntBASIC3.92□□□□□ -1.78
NIPAL3Q6P499 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
NIPAL3Q6P499 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms