Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC092821.3-202ENST00000641304 2767 ntBASIC7.51□□□□□ -1.21
RC3H1Q5TC82 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
RC3H1Q5TC82 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AL592429.1-201ENST00000403909 1473 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 RNA5SP443-201ENST00000363083 132 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 RNU6-282P-201ENST00000365357 103 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 RNU1-39P-201ENST00000383897 165 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 RPL7P58-201ENST00000402913 758 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 MRPL50P2-201ENST00000416821 482 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AP001324.1-201ENST00000428553 399 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC007559.1-201ENST00000428736 355 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 NPM1P34-201ENST00000428821 893 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 NANOGP6-201ENST00000429190 847 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 RPS27P18-201ENST00000431701 247 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC015983.1-201ENST00000441577 373 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC104306.1-201ENST00000449702 371 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 RN7SL30P-201ENST00000488416 306 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC105417.1-201ENST00000514691 285 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AP005902.1-201ENST00000521358 186 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AP001189.2-201ENST00000527320 189 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 FRG2DP-202ENST00000566967 323 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 MIR4742-201ENST00000581069 85 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 MIR4260-201ENST00000583107 67 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 MKKS-204ENST00000639674 192 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 MAPK10-323ENST00000641493 3207 ntBASIC7.5□□□□□ -1.21
RC3H1Q5TC82 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RC3H1Q5TC82 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 OFD1P17-201ENST00000437639 3018 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC090220.1-201ENST00000593078 1699 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RNU1-35P-201ENST00000362782 153 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RNU6-1339P-201ENST00000363574 91 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RNU6-702P-201ENST00000364982 107 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RNA5SP211-201ENST00000365516 117 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 Y_RNA.381-201ENST00000365666 102 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL451142.1-201ENST00000375867 775 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 SNORA69-201ENST00000383895 132 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC113412.1-201ENST00000425840 504 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 CACYBPP2-201ENST00000453625 678 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.49□□□□□ -1.21
RC3H1Q5TC82 HMGN2P26-201ENST00000463169 339 ntBASIC7.49□□□□□ -1.21
RC3H1Q5TC82 RPS27AP17-201ENST00000463344 455 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms