Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AC022509.4-201ENST00000621404 572 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 AL034549.2-201ENST00000618285 3373 ntBASIC5.27□□□□□ -1.57
SLC44A4Q53GD3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 MAPK10-263ENST00000641052 4307 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC021755.1-201ENST00000559747 1447 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL359643.1-201ENST00000404109 423 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 RN7SKP247-201ENST00000411094 308 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 NRBF2P2-201ENST00000413087 861 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 QRSL1P2-201ENST00000418582 964 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 PAICSP7-201ENST00000419829 962 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC012519.1-201ENST00000424588 610 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 PPIAP13-201ENST00000434706 478 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL161722.2-201ENST00000434731 981 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC093155.1-201ENST00000440164 826 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL137845.2-201ENST00000444292 988 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 ANKRD26P4-201ENST00000455755 950 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 GAPDHP56-201ENST00000506031 988 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 IGKV1-32-201ENST00000519290 311 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AP003461.1-201ENST00000528866 78 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC105254.2-201ENST00000603636 436 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 MIR6758-201ENST00000620653 63 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC116563.2-201ENST00000624751 535 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AL355852.1-201ENST00000454081 1771 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 AC096656.1-201ENST00000623826 1364 ntBASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
SLC44A4Q53GD3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 FAM3C2-201ENST00000312214 681 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RNU6-157P-201ENST00000383957 107 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 Y_RNA.408-201ENST00000383987 102 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RSL24D1P4-201ENST00000400938 484 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 P2RY10P2-201ENST00000416730 913 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC006960.1-201ENST00000419980 153 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 USP9YP26-201ENST00000421008 661 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AL365396.1-201ENST00000430854 671 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 MUPP-201ENST00000438111 566 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 MTCO2P7-201ENST00000446518 666 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC006967.1-201ENST00000467608 589 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RPL21P6-201ENST00000479171 504 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms