Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.39□□□□□ -1.55
IRF9Q00978 AP002748.2-201ENST00000528671 348 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.39□□□□□ -1.55
IRF9Q00978 OR6C73P-201ENST00000546432 358 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.39□□□□□ -1.55
IRF9Q00978 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.39□□□□□ -1.55
IRF9Q00978 SULT1C2P2-201ENST00000562517 294 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 AC234778.2-201ENST00000566241 354 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 AC104785.1-201ENST00000603220 588 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 AC244107.2-201ENST00000611773 76 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 uc_338.7-201ENST00000621834 124 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 AC129915.3-201ENST00000634128 948 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 AC099654.6-201ENST00000636487 512 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 USP9YP4-201ENST00000424401 1745 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 AL442128.2-201ENST00000620246 1824 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.39□□□□□ -1.55
IRF9Q00978 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IRF9Q00978 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
IRF9Q00978 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
IRF9Q00978 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
IRF9Q00978 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IRF9Q00978 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
IRF9Q00978 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
IRF9Q00978 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IRF9Q00978 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
IRF9Q00978 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 RNA5SP122-201ENST00000384457 108 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AL078604.1-201ENST00000404609 466 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IRF9Q00978 AL662874.1-201ENST00000426065 230 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 RPL19P16-201ENST00000433839 588 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 RPL37P21-201ENST00000435890 276 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 MTATP6P23-201ENST00000440153 476 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC005297.1-201ENST00000444765 862 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 VN1R10P-201ENST00000447106 875 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC073909.1-201ENST00000447112 999 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 RPL39P6-201ENST00000448289 150 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.38□□□□□ -1.55
IRF9Q00978 AL035090.1-201ENST00000454835 332 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 KLF3P2-201ENST00000465138 268 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC011476.1-201ENST00000466725 307 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC092757.1-201ENST00000467293 467 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC090602.1-201ENST00000469695 252 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 TMED11P-201ENST00000479478 690 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 CR383656.1-201ENST00000484916 377 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC021678.1-201ENST00000505195 936 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC026412.2-201ENST00000512270 1075 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.38□□□□□ -1.55
IRF9Q00978 SNORA43.3-201ENST00000517240 103 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AP000859.1-201ENST00000525536 307 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 OR5M2P-201ENST00000529003 936 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
IRF9Q00978 OR4A12P-201ENST00000530847 918 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC068587.4-201ENST00000533893 186 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 EIF5A2P1-201ENST00000564027 460 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 PSMA6P4-201ENST00000603247 718 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC112187.2-201ENST00000604345 283 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AL022394.1-201ENST00000606979 292 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.38□□□□□ -1.55
IRF9Q00978 AC103710.4-201ENST00000609301 899 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AL365181.4-201ENST00000609800 547 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.38□□□□□ -1.55
IRF9Q00978 AL603839.4-201ENST00000624658 1005 ntBASIC5.38□□□□□ -1.55
IRF9Q00978 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IRF9Q00978 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
IRF9Q00978 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
IRF9Q00978 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms