Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 AL161729.3-201ENST00000603533 673 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC115286.1-201ENST00000604298 434 ntBASIC5.57□□□□□ -1.52
YBX1P67809 MEMO1P5-201ENST00000604810 406 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC103710.4-201ENST00000609301 899 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC015712.7-201ENST00000615211 635 ntBASIC5.57□□□□□ -1.52
YBX1P67809 MKKS-204ENST00000639674 192 ntBASIC5.57□□□□□ -1.52
YBX1P67809 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
YBX1P67809 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 GTF2IP4-201ENST00000453092 2054 ntBASIC5.57□□□□□ -1.52
YBX1P67809 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 AL592429.1-201ENST00000403909 1473 ntBASIC5.57□□□□□ -1.52
YBX1P67809 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.56□□□□□ -1.52
YBX1P67809 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
YBX1P67809 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
YBX1P67809 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
YBX1P67809 SNORD56.2-201ENST00000363242 71 ntBASIC5.56□□□□□ -1.52
YBX1P67809 RNU6-666P-201ENST00000363499 107 ntBASIC5.56□□□□□ -1.52
YBX1P67809 Y_RNA.279-201ENST00000364763 95 ntBASIC5.56□□□□□ -1.52
YBX1P67809 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 RNU6-1227P-201ENST00000383981 107 ntBASIC5.56□□□□□ -1.52
YBX1P67809 RNU6-483P-201ENST00000384088 108 ntBASIC5.56□□□□□ -1.52
YBX1P67809 TMSB4XP8-201ENST00000402089 135 ntBASIC5.56□□□□□ -1.52
YBX1P67809 RPL7P58-201ENST00000402913 758 ntBASIC5.56□□□□□ -1.52
YBX1P67809 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 OR51A3P-201ENST00000413596 924 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 TMSB4XP6-201ENST00000415187 135 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 AC062016.2-201ENST00000420950 676 ntBASIC5.56□□□□□ -1.52
YBX1P67809 TMSB4XP1-201ENST00000424567 135 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC005033.1-201ENST00000428904 813 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC005534.2-201ENST00000431047 433 ntBASIC5.56□□□□□ -1.52
YBX1P67809 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 AC096775.1-201ENST00000437724 448 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 RABEPKP1-201ENST00000440529 1026 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC108463.1-201ENST00000450258 347 ntBASIC5.56□□□□□ -1.52
YBX1P67809 FABP3P2-201ENST00000453169 399 ntBASIC5.56□□□□□ -1.52
YBX1P67809 MTCO3P20-201ENST00000454926 688 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC099521.1-201ENST00000482557 334 ntBASIC5.56□□□□□ -1.52
YBX1P67809 PPIAP19-201ENST00000486414 492 ntBASIC5.56□□□□□ -1.52
YBX1P67809 NIPA2P2-201ENST00000496376 1083 ntBASIC5.56□□□□□ -1.52
YBX1P67809 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 HMGB1P29-201ENST00000505659 499 ntBASIC5.56□□□□□ -1.52
YBX1P67809 HMGB1P28-201ENST00000507778 552 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC048346.1-201ENST00000510247 144 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 SCARNA6.1-201ENST00000516989 238 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 AC109635.6-201ENST00000525487 1113 ntBASIC5.56□□□□□ -1.52
YBX1P67809 OR5AP1P-201ENST00000529730 940 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.56□□□□□ -1.52
YBX1P67809 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 AL359212.1-201ENST00000556608 614 ntBASIC5.56□□□□□ -1.52
YBX1P67809 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 AC087477.6-201ENST00000559595 843 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.56□□□□□ -1.52
YBX1P67809 AC025678.1-201ENST00000567861 338 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AL513327.3-201ENST00000602618 469 ntBASIC5.56□□□□□ -1.52
YBX1P67809 LLPHP1-201ENST00000603571 367 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC112191.3-201ENST00000604371 277 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC007363.1-201ENST00000604736 620 ntBASIC5.56□□□□□ -1.52
YBX1P67809 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.56□□□□□ -1.52
YBX1P67809 AC119674.1-212ENST00000641155 993 ntBASIC5.56□□□□□ -1.52
YBX1P67809 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.56□□□□□ -1.52
YBX1P67809 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.56□□□□□ -1.52
YBX1P67809 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
YBX1P67809 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 OR4G11P-202ENST00000642116 1414 ntBASIC5.56□□□□□ -1.52
YBX1P67809 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
YBX1P67809 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 MT-RNR2-201ENST00000387347 1559 ntBASIC5.55□□□□□ -1.52
YBX1P67809 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
YBX1P67809 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.55□□□□□ -1.52
YBX1P67809 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
YBX1P67809 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.55□□□□□ -1.52
YBX1P67809 SNORA64.1-201ENST00000362600 132 ntBASIC5.55□□□□□ -1.52
YBX1P67809 Y_RNA.97-201ENST00000363094 102 ntBASIC5.55□□□□□ -1.52
YBX1P67809 RNA5SP394-201ENST00000364216 119 ntBASIC5.55□□□□□ -1.52
YBX1P67809 RNU6-619P-201ENST00000365146 108 ntBASIC5.55□□□□□ -1.52
YBX1P67809 RN7SKP292-201ENST00000365522 317 ntBASIC5.55□□□□□ -1.52
YBX1P67809 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms