Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ACLYP53396 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.4□□□□□ -1.71
ACLYP53396 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACLYP53396 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACLYP53396 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACLYP53396 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 RNU6-386P-201ENST00000362650 107 ntBASIC4.39□□□□□ -1.71
ACLYP53396 RNU4-44P-201ENST00000363050 141 ntBASIC4.39□□□□□ -1.71
ACLYP53396 RNA5SP72-201ENST00000364442 117 ntBASIC4.39□□□□□ -1.71
ACLYP53396 SNORD3H-201ENST00000384486 214 ntBASIC4.39□□□□□ -1.71
ACLYP53396 ZNF602P-201ENST00000405929 924 ntBASIC4.39□□□□□ -1.71
ACLYP53396 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.39□□□□□ -1.71
ACLYP53396 AL035423.1-201ENST00000420331 213 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AL591419.1-201ENST00000427423 339 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACLYP53396 AC104978.1-201ENST00000449387 391 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.39□□□□□ -1.71
ACLYP53396 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.39□□□□□ -1.71
ACLYP53396 FABP3P2-201ENST00000453169 399 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AL133162.1-201ENST00000463228 453 ntBASIC4.39□□□□□ -1.71
ACLYP53396 HMGN1P11-201ENST00000508668 303 ntBASIC4.39□□□□□ -1.71
ACLYP53396 SCARNA13-201ENST00000516672 275 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AP000889.1-201ENST00000530968 660 ntBASIC4.39□□□□□ -1.71
ACLYP53396 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.39□□□□□ -1.71
ACLYP53396 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.39□□□□□ -1.71
ACLYP53396 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.39□□□□□ -1.71
ACLYP53396 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AC140113.4-201ENST00000622087 222 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AC079298.2-201ENST00000623885 459 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AC092159.4-201ENST00000624944 550 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AF001550.2-201ENST00000636643 217 ntBASIC4.39□□□□□ -1.71
ACLYP53396 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACLYP53396 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACLYP53396 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
ACLYP53396 BX005019.1-201ENST00000561881 1810 ntBASIC4.39□□□□□ -1.71
ACLYP53396 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACLYP53396 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ACLYP53396 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ACLYP53396 AC093719.1-202ENST00000392735 373 ntBASIC4.38□□□□□ -1.71
ACLYP53396 AC007066.1-201ENST00000392902 381 ntBASIC4.38□□□□□ -1.71
ACLYP53396 AL034374.1-201ENST00000406329 351 ntBASIC4.38□□□□□ -1.71
ACLYP53396 PGBD4P8-201ENST00000412993 562 ntBASIC4.38□□□□□ -1.71
ACLYP53396 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 CACYBPP1-201ENST00000438592 684 ntBASIC4.38□□□□□ -1.71
ACLYP53396 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.38□□□□□ -1.71
ACLYP53396 RAD23BP3-201ENST00000454157 1152 ntBASIC4.38□□□□□ -1.71
ACLYP53396 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.38□□□□□ -1.71
ACLYP53396 DEFB109F-201ENST00000491870 277 ntBASIC4.38□□□□□ -1.71
ACLYP53396 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.38□□□□□ -1.71
ACLYP53396 AC147055.1-201ENST00000509261 750 ntBASIC4.38□□□□□ -1.71
ACLYP53396 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.38□□□□□ -1.71
ACLYP53396 AC074250.1-201ENST00000511117 192 ntBASIC4.38□□□□□ -1.71
ACLYP53396 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.38□□□□□ -1.71
ACLYP53396 AC007991.1-201ENST00000522680 631 ntBASIC4.38□□□□□ -1.71
ACLYP53396 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.38□□□□□ -1.71
ACLYP53396 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.38□□□□□ -1.71
ACLYP53396 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.38□□□□□ -1.71
ACLYP53396 RPL21P7-201ENST00000557463 483 ntBASIC4.38□□□□□ -1.71
ACLYP53396 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.38□□□□□ -1.71
ACLYP53396 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.38□□□□□ -1.71
ACLYP53396 AC084373.1-201ENST00000603311 235 ntBASIC4.38□□□□□ -1.71
ACLYP53396 U3.45-201ENST00000607547 219 ntBASIC4.38□□□□□ -1.71
ACLYP53396 AC073530.2-201ENST00000623987 261 ntBASIC4.38□□□□□ -1.71
ACLYP53396 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.38□□□□□ -1.71
ACLYP53396 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.38□□□□□ -1.71
ACLYP53396 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.38□□□□□ -1.71
ACLYP53396 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.38□□□□□ -1.71
ACLYP53396 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACLYP53396 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
ACLYP53396 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ACLYP53396 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ACLYP53396 AC032011.1-201ENST00000611703 1549 ntBASIC4.37□□□□□ -1.71
ACLYP53396 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ACLYP53396 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.37□□□□□ -1.71
ACLYP53396 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.37□□□□□ -1.71
ACLYP53396 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ACLYP53396 LINC01109-201ENST00000603837 3081 ntBASIC4.37□□□□□ -1.71
ACLYP53396 OR6K4P-201ENST00000423179 955 ntBASIC4.37□□□□□ -1.71
ACLYP53396 AC073335.1-201ENST00000427776 363 ntBASIC4.37□□□□□ -1.71
ACLYP53396 HIGD1AP4-201ENST00000430194 280 ntBASIC4.37□□□□□ -1.71
ACLYP53396 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.37□□□□□ -1.71
ACLYP53396 HSPD1P21-201ENST00000436541 245 ntBASIC4.37□□□□□ -1.71
ACLYP53396 BUD31P2-201ENST00000449374 300 ntBASIC4.37□□□□□ -1.71
ACLYP53396 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.37□□□□□ -1.71
ACLYP53396 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms