Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RN7SL812P-201ENST00000493791 279 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 PRELID3BP6-201ENST00000503839 571 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.8□□□□□ -1.64
CLCN3P51790 Y_RNA.717-201ENST00000517106 92 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCN3P51790 HMGB1P1-201ENST00000522557 636 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.8□□□□□ -1.64
CLCN3P51790 TVP23BP1-201ENST00000557500 617 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCN3P51790 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCN3P51790 HMGB2P1-201ENST00000591146 634 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC067959.1-201ENST00000604334 379 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 Z98200.1-201ENST00000607298 470 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 AL021997.2-201ENST00000615674 271 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 U6.107-201ENST00000637108 79 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 FP325313.1-201ENST00000638228 703 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 AC100871.1-201ENST00000507871 1456 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCN3P51790 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCN3P51790 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 AC073055.1-201ENST00000456901 1621 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCN3P51790 LARP1BP1-201ENST00000506036 1359 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 AC106754.1-201ENST00000562632 1513 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC005332.5-201ENST00000591222 2919 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 SNORD65C-201ENST00000390962 71 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 RNA5SP36-201ENST00000410197 133 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC002524.1-201ENST00000411687 547 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCN3P51790 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCN3P51790 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCN3P51790 AC092447.3-201ENST00000426027 686 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 CBX1P4-201ENST00000439415 457 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC068135.1-201ENST00000446164 246 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AL050341.1-201ENST00000447743 313 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCN3P51790 OR51B8P-201ENST00000449892 769 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC009963.2-201ENST00000453431 138 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AL354710.1-201ENST00000453641 246 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC005229.2-201ENST00000456995 399 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 RNU6-1218P-201ENST00000458990 108 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 METTL15P1-201ENST00000481421 1045 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCN3P51790 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCN3P51790 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCN3P51790 RNA5SP519-201ENST00000516480 119 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCN3P51790 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCN3P51790 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.79□□□□□ -1.64
CLCN3P51790 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCN3P51790 AC007224.1-201ENST00000564410 144 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 MIR3160-1-201ENST00000577972 85 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCN3P51790 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCN3P51790 AC069431.2-201ENST00000604149 1099 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC010201.1-201ENST00000605051 540 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC006946.3-201ENST00000609791 756 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 ZYXP1-201ENST00000617638 118 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC007546.1-201ENST00000619452 559 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AC007546.2-201ENST00000623996 360 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 AL109659.3-201ENST00000624985 950 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 AL445437.1-201ENST00000623157 3087 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCN3P51790 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 AC009313.2-201ENST00000417893 1941 ntBASIC4.79□□□□□ -1.64
CLCN3P51790 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CLCN3P51790 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCN3P51790 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCN3P51790 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCN3P51790 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCN3P51790 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCN3P51790 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms