Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.83□□□□□ -1.8
ATRXP46100 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ATRXP46100 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATRXP46100 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATRXP46100 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ATRXP46100 SNORA60-201ENST00000362396 134 ntBASIC3.83□□□□□ -1.8
ATRXP46100 RNU1-20P-201ENST00000363314 162 ntBASIC3.83□□□□□ -1.8
ATRXP46100 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATRXP46100 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 RPS4XP10-201ENST00000465034 731 ntBASIC3.83□□□□□ -1.8
ATRXP46100 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.83□□□□□ -1.8
ATRXP46100 UBE2CP3-201ENST00000502715 450 ntBASIC3.83□□□□□ -1.8
ATRXP46100 AC096571.1-202ENST00000506634 735 ntBASIC3.83□□□□□ -1.8
ATRXP46100 STMN1P2-201ENST00000508435 439 ntBASIC3.83□□□□□ -1.8
ATRXP46100 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.83□□□□□ -1.8
ATRXP46100 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.83□□□□□ -1.8
ATRXP46100 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATRXP46100 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 AC027176.2-201ENST00000559166 746 ntBASIC3.83□□□□□ -1.8
ATRXP46100 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.83□□□□□ -1.8
ATRXP46100 BNIP3P31-201ENST00000604515 566 ntBASIC3.83□□□□□ -1.8
ATRXP46100 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.83□□□□□ -1.8
ATRXP46100 FP325313.1-201ENST00000638228 703 ntBASIC3.83□□□□□ -1.8
ATRXP46100 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATRXP46100 OR4G1P-202ENST00000641173 1788 ntBASIC3.83□□□□□ -1.8
ATRXP46100 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ATRXP46100 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.83□□□□□ -1.8
ATRXP46100 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.82□□□□□ -1.8
ATRXP46100 ENSAP1-201ENST00000392855 326 ntBASIC3.82□□□□□ -1.8
ATRXP46100 RN7SKP182-201ENST00000410772 298 ntBASIC3.82□□□□□ -1.8
ATRXP46100 PCNPP4-201ENST00000414817 517 ntBASIC3.82□□□□□ -1.8
ATRXP46100 COTL1P1-201ENST00000422309 375 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.82□□□□□ -1.8
ATRXP46100 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 AL590762.3-201ENST00000436372 640 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 AL671855.1-201ENST00000446875 1203 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC012671.1-201ENST00000451912 203 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.82□□□□□ -1.8
ATRXP46100 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 MIR6891-201ENST00000618788 93 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.82□□□□□ -1.8
ATRXP46100 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 AL445984.1-201ENST00000637834 659 ntBASIC3.82□□□□□ -1.8
ATRXP46100 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 USP8P1-201ENST00000494673 3183 ntBASIC3.82□□□□□ -1.8
ATRXP46100 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 ADAM5-202ENST00000399789 1942 ntBASIC3.82□□□□□ -1.8
ATRXP46100 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATRXP46100 RNU4-64P-201ENST00000410795 131 ntBASIC3.82□□□□□ -1.8
ATRXP46100 ATP5HP2-201ENST00000433885 485 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AL158053.1-201ENST00000441503 453 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC092902.1-201ENST00000486999 259 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC108729.1-201ENST00000487812 947 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.82□□□□□ -1.8
ATRXP46100 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.82□□□□□ -1.8
ATRXP46100 AC025857.2-201ENST00000602711 238 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AL049777.1-201ENST00000622740 518 ntBASIC3.82□□□□□ -1.8
ATRXP46100 AC008993.2-201ENST00000631744 806 ntBASIC3.82□□□□□ -1.8
ATRXP46100 ATE1-AS1-202ENST00000636460 506 ntBASIC3.82□□□□□ -1.8
ATRXP46100 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 AL592494.2-201ENST00000425455 1548 ntBASIC3.82□□□□□ -1.8
ATRXP46100 HSPA8P19-201ENST00000505359 1517 ntBASIC3.82□□□□□ -1.8
ATRXP46100 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ATRXP46100 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.82□□□□□ -1.8
ATRXP46100 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
ATRXP46100 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.81□□□□□ -1.8
ATRXP46100 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATRXP46100 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ATRXP46100 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATRXP46100 AL450338.1-201ENST00000407987 512 ntBASIC3.81□□□□□ -1.8
ATRXP46100 RNA5SP80-201ENST00000410475 111 ntBASIC3.81□□□□□ -1.8
ATRXP46100 RPL21P43-201ENST00000425440 472 ntBASIC3.81□□□□□ -1.8
ATRXP46100 Z85994.2-201ENST00000434327 452 ntBASIC3.81□□□□□ -1.8
ATRXP46100 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.81□□□□□ -1.8
ATRXP46100 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.81□□□□□ -1.8
ATRXP46100 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms