Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 MIR6867-201ENST00000610636 67 ntBASIC4.02□□□□□ -1.77
RORAP35398 AC019278.1-201ENST00000623516 479 ntBASIC4.02□□□□□ -1.77
RORAP35398 AC116563.2-201ENST00000624751 535 ntBASIC4.02□□□□□ -1.77
RORAP35398 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RORAP35398 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
RORAP35398 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RORAP35398 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
RORAP35398 MIR421-201ENST00000365696 85 ntBASIC4.01□□□□□ -1.77
RORAP35398 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.01□□□□□ -1.77
RORAP35398 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.01□□□□□ -1.77
RORAP35398 SNORA37-201ENST00000384504 129 ntBASIC4.01□□□□□ -1.77
RORAP35398 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.01□□□□□ -1.77
RORAP35398 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.01□□□□□ -1.77
RORAP35398 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.01□□□□□ -1.77
RORAP35398 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.01□□□□□ -1.77
RORAP35398 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.01□□□□□ -1.77
RORAP35398 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.01□□□□□ -1.77
RORAP35398 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.01□□□□□ -1.77
RORAP35398 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.01□□□□□ -1.77
RORAP35398 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.01□□□□□ -1.77
RORAP35398 RPL5P32-201ENST00000454085 879 ntBASIC4.01□□□□□ -1.77
RORAP35398 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
RORAP35398 AL132838.2-201ENST00000492041 314 ntBASIC4.01□□□□□ -1.77
RORAP35398 AC104164.2-201ENST00000496953 495 ntBASIC4.01□□□□□ -1.77
RORAP35398 AC006499.6-201ENST00000511169 607 ntBASIC4.01□□□□□ -1.77
RORAP35398 FTH1P9-201ENST00000513251 355 ntBASIC4.01□□□□□ -1.77
RORAP35398 PHBP17-201ENST00000528576 541 ntBASIC4.01□□□□□ -1.77
RORAP35398 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RORAP35398 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.01□□□□□ -1.77
RORAP35398 AC074029.2-201ENST00000551045 634 ntBASIC4.01□□□□□ -1.77
RORAP35398 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.01□□□□□ -1.77
RORAP35398 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.01□□□□□ -1.77
RORAP35398 NF1P5-201ENST00000588287 448 ntBASIC4.01□□□□□ -1.77
RORAP35398 AP004372.1-201ENST00000604842 844 ntBASIC4.01□□□□□ -1.77
RORAP35398 AC112484.5-201ENST00000624189 228 ntBASIC4.01□□□□□ -1.77
RORAP35398 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.01□□□□□ -1.77
RORAP35398 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RORAP35398 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RORAP35398 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RORAP35398 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RORAP35398 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RORAP35398 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
RORAP35398 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
RORAP35398 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RORAP35398 RNA5SP388-201ENST00000362584 119 ntBASIC4□□□□□ -1.77
RORAP35398 RN7SKP280-201ENST00000364196 304 ntBASIC4□□□□□ -1.77
RORAP35398 RNA5SP498-201ENST00000411342 120 ntBASIC4□□□□□ -1.77
RORAP35398 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4□□□□□ -1.77
RORAP35398 AC013404.1-201ENST00000413068 249 ntBASIC4□□□□□ -1.77
RORAP35398 AL161631.1-201ENST00000417933 486 ntBASIC4□□□□□ -1.77
RORAP35398 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4□□□□□ -1.77
RORAP35398 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4□□□□□ -1.77
RORAP35398 AL353898.1-201ENST00000444055 238 ntBASIC4□□□□□ -1.77
RORAP35398 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4□□□□□ -1.77
RORAP35398 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4□□□□□ -1.77
RORAP35398 ABCF2P2-201ENST00000450549 296 ntBASIC4□□□□□ -1.77
RORAP35398 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4□□□□□ -1.77
RORAP35398 AC092045.1-201ENST00000495716 1231 ntBASIC4□□□□□ -1.77
RORAP35398 BNIP3P41-201ENST00000503774 571 ntBASIC4□□□□□ -1.77
RORAP35398 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4□□□□□ -1.77
RORAP35398 ACTR6P1-201ENST00000514311 1104 ntBASIC4□□□□□ -1.77
RORAP35398 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4□□□□□ -1.77
RORAP35398 RNU6-491P-201ENST00000516099 110 ntBASIC4□□□□□ -1.77
RORAP35398 AC008694.2-201ENST00000517591 306 ntBASIC4□□□□□ -1.77
RORAP35398 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4□□□□□ -1.77
RORAP35398 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4□□□□□ -1.77
RORAP35398 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4□□□□□ -1.77
RORAP35398 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4□□□□□ -1.77
RORAP35398 AC105233.3-201ENST00000531125 744 ntBASIC4□□□□□ -1.77
RORAP35398 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4□□□□□ -1.77
RORAP35398 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4□□□□□ -1.77
RORAP35398 AC106785.1-201ENST00000565935 262 ntBASIC4□□□□□ -1.77
RORAP35398 AC093227.2-201ENST00000589357 285 ntBASIC4□□□□□ -1.77
RORAP35398 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4□□□□□ -1.77
RORAP35398 AC073111.2-201ENST00000605657 1075 ntBASIC4□□□□□ -1.77
RORAP35398 AL355816.1-201ENST00000607951 118 ntBASIC4□□□□□ -1.77
RORAP35398 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4□□□□□ -1.77
RORAP35398 AL645927.2-201ENST00000618350 349 ntBASIC4□□□□□ -1.77
RORAP35398 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4□□□□□ -1.77
RORAP35398 AC119674.1-220ENST00000641502 1048 ntBASIC4□□□□□ -1.77
RORAP35398 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RORAP35398 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4□□□□□ -1.77
RORAP35398 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RORAP35398 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 XIAPP3-201ENST00000312918 795 ntBASIC3.99□□□□□ -1.77
RORAP35398 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
RORAP35398 AC067945.1-201ENST00000342609 618 ntBASIC3.99□□□□□ -1.77
RORAP35398 RNU1-15P-201ENST00000353977 144 ntBASIC3.99□□□□□ -1.77
RORAP35398 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 RNA5SP130-201ENST00000364431 114 ntBASIC3.99□□□□□ -1.77
RORAP35398 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RORAP35398 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms