Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPA3P35244 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RPA3P35244 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPA3P35244 RN7SKP227-201ENST00000364445 330 ntBASIC3.88□□□□□ -1.79
RPA3P35244 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPA3P35244 RNU1-13P-201ENST00000384499 162 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AL034374.1-201ENST00000406329 351 ntBASIC3.88□□□□□ -1.79
RPA3P35244 RNU6-603P-201ENST00000411403 107 ntBASIC3.88□□□□□ -1.79
RPA3P35244 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.88□□□□□ -1.79
RPA3P35244 OR8G2P-201ENST00000412796 908 ntBASIC3.88□□□□□ -1.79
RPA3P35244 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPA3P35244 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.88□□□□□ -1.79
RPA3P35244 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.88□□□□□ -1.79
RPA3P35244 RPL12P46-201ENST00000436610 195 ntBASIC3.88□□□□□ -1.79
RPA3P35244 CACYBPP1-201ENST00000438592 684 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AL162151.2-201ENST00000448875 158 ntBASIC3.88□□□□□ -1.79
RPA3P35244 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.88□□□□□ -1.79
RPA3P35244 AC098824.1-201ENST00000453565 980 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AL132838.2-201ENST00000492041 314 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.88□□□□□ -1.79
RPA3P35244 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.88□□□□□ -1.79
RPA3P35244 RNU6-347P-201ENST00000516658 105 ntBASIC3.88□□□□□ -1.79
RPA3P35244 SUMO2P20-201ENST00000520803 283 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AC091516.1-201ENST00000549191 703 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AC068446.3-201ENST00000555285 382 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.88□□□□□ -1.79
RPA3P35244 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.88□□□□□ -1.79
RPA3P35244 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.88□□□□□ -1.79
RPA3P35244 AL133247.2-201ENST00000603236 482 ntBASIC3.88□□□□□ -1.79
RPA3P35244 AC078899.5-201ENST00000612475 178 ntBASIC3.88□□□□□ -1.79
RPA3P35244 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.88□□□□□ -1.79
RPA3P35244 AL139089.1-201ENST00000620372 975 ntBASIC3.88□□□□□ -1.79
RPA3P35244 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPA3P35244 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.88□□□□□ -1.79
RPA3P35244 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.88□□□□□ -1.79
RPA3P35244 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPA3P35244 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPA3P35244 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPA3P35244 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPA3P35244 AL391417.1-201ENST00000404100 426 ntBASIC3.87□□□□□ -1.79
RPA3P35244 RNU6-628P-201ENST00000410675 107 ntBASIC3.87□□□□□ -1.79
RPA3P35244 RPL30P2-201ENST00000414021 291 ntBASIC3.87□□□□□ -1.79
RPA3P35244 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.87□□□□□ -1.79
RPA3P35244 OR6K4P-201ENST00000423179 955 ntBASIC3.87□□□□□ -1.79
RPA3P35244 NIPA2P1-201ENST00000426223 976 ntBASIC3.87□□□□□ -1.79
RPA3P35244 OR5AW1P-201ENST00000426334 1006 ntBASIC3.87□□□□□ -1.79
RPA3P35244 YY1P1-201ENST00000427625 668 ntBASIC3.87□□□□□ -1.79
RPA3P35244 OR6C71P-201ENST00000432580 913 ntBASIC3.87□□□□□ -1.79
RPA3P35244 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.87□□□□□ -1.79
RPA3P35244 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.87□□□□□ -1.79
RPA3P35244 HSFY6P-201ENST00000445573 403 ntBASIC3.87□□□□□ -1.79
RPA3P35244 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 RPL5P32-201ENST00000454085 879 ntBASIC3.87□□□□□ -1.79
RPA3P35244 SEPT7P6-201ENST00000469999 1143 ntBASIC3.87□□□□□ -1.79
RPA3P35244 METTL15P1-201ENST00000481421 1045 ntBASIC3.87□□□□□ -1.79
RPA3P35244 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 PRELID3BP5-201ENST00000508612 460 ntBASIC3.87□□□□□ -1.79
RPA3P35244 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.87□□□□□ -1.79
RPA3P35244 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 AC087888.1-201ENST00000550884 1254 ntBASIC3.87□□□□□ -1.79
RPA3P35244 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 AC068714.1-201ENST00000559623 800 ntBASIC3.87□□□□□ -1.79
RPA3P35244 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.87□□□□□ -1.79
RPA3P35244 AC007224.1-201ENST00000564410 144 ntBASIC3.87□□□□□ -1.79
RPA3P35244 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.87□□□□□ -1.79
RPA3P35244 AC010615.3-201ENST00000597319 394 ntBASIC3.87□□□□□ -1.79
RPA3P35244 AC006946.3-201ENST00000609791 756 ntBASIC3.87□□□□□ -1.79
RPA3P35244 OR6C71P-202ENST00000641886 1107 ntBASIC3.87□□□□□ -1.79
RPA3P35244 OR5AC4P-202ENST00000642086 985 ntBASIC3.87□□□□□ -1.79
RPA3P35244 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.87□□□□□ -1.79
RPA3P35244 AC092079.1-201ENST00000558620 1985 ntBASIC3.87□□□□□ -1.79
RPA3P35244 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPA3P35244 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RPA3P35244 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPA3P35244 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.86□□□□□ -1.79
RPA3P35244 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC004975.1-201ENST00000428733 208 ntBASIC3.86□□□□□ -1.79
RPA3P35244 OR4C10P-201ENST00000434991 931 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.86□□□□□ -1.79
RPA3P35244 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.86□□□□□ -1.79
RPA3P35244 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.86□□□□□ -1.79
RPA3P35244 CALM1P2-201ENST00000452941 448 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.86□□□□□ -1.79
RPA3P35244 AC021146.1-201ENST00000511202 716 ntBASIC3.86□□□□□ -1.79
RPA3P35244 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.86□□□□□ -1.79
RPA3P35244 AC087369.1-201ENST00000520775 996 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.86□□□□□ -1.79
RPA3P35244 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.86□□□□□ -1.79
RPA3P35244 PDCD5P1-201ENST00000543528 309 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.86□□□□□ -1.79
RPA3P35244 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.86□□□□□ -1.79
RPA3P35244 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC116447.1-201ENST00000613153 453 ntBASIC3.86□□□□□ -1.79
RPA3P35244 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.86□□□□□ -1.79
RPA3P35244 BMS1P21-201ENST00000634565 365 ntBASIC3.86□□□□□ -1.79
RPA3P35244 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms