Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
ABCD3P28288 MFSD8-220ENST00000641243 1422 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 OR4A15-201ENST00000314706 1035 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 SNORA73.1-201ENST00000363107 205 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 MIR649-201ENST00000384843 97 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ABCD3P28288 FCF1P5-201ENST00000406490 482 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC069218.2-201ENST00000411665 344 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC007738.1-201ENST00000413892 348 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 HIGD1AP15-201ENST00000416198 280 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 RBMY2KP-201ENST00000418221 992 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 MTCO3P1-205ENST00000422088 832 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 COX6CP15-201ENST00000426313 211 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.57□□□□□ -1.68
ABCD3P28288 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 VN1R54P-201ENST00000435210 1049 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 RPL7P11-201ENST00000437586 658 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 PRPF38AP2-201ENST00000438179 851 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 GTF3AP5-201ENST00000442645 697 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 RNF138P1-201ENST00000502765 546 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 MTCO1P30-201ENST00000515244 580 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC104057.1-201ENST00000515547 497 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 RNU6-1225P-201ENST00000516336 65 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AF186190.1-201ENST00000517470 480 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.57□□□□□ -1.68
ABCD3P28288 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
ABCD3P28288 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.57□□□□□ -1.68
ABCD3P28288 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC234772.3-201ENST00000602277 528 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC022022.2-201ENST00000602989 360 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC133552.5-201ENST00000604266 540 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC005332.6-201ENST00000613178 446 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 BX005214.3-202ENST00000619809 325 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AC019206.1-201ENST00000621938 425 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 AP000648.2-201ENST00000624182 404 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 MIR4496-201ENST00000635896 61 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 MKKS-204ENST00000639674 192 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ABCD3P28288 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 AC090229.1-201ENST00000590983 1609 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.57□□□□□ -1.68
ABCD3P28288 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ABCD3P28288 AC117529.2-201ENST00000512159 2068 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.57□□□□□ -1.68
ABCD3P28288 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ABCD3P28288 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 AC131971.1-201ENST00000332881 1482 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCD3P28288 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ABCD3P28288 SNORA58B-201ENST00000364259 136 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 SNORA51.8-201ENST00000384234 132 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 MIR513B-201ENST00000385136 84 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC013442.1-201ENST00000397347 228 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 SSXP10-201ENST00000402595 565 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 MIR1271-201ENST00000408537 86 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
ABCD3P28288 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCD3P28288 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCD3P28288 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 CEACAMP9-201ENST00000442990 513 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 Z77249.1-201ENST00000444622 1175 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms