Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPS26P47-201ENST00000427219 348 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 COX6B1P7-201ENST00000430845 235 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 RPS20P1-201ENST00000434853 354 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 AC007000.2-201ENST00000442564 487 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 AC006326.1-201ENST00000445465 787 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 RPS7P7-201ENST00000463499 571 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 AC006517.1-201ENST00000480485 328 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 SYT14P1-201ENST00000481459 721 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.14□□□□□ -1.75
XRCC1P18887 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.14□□□□□ -1.75
XRCC1P18887 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.14□□□□□ -1.75
XRCC1P18887 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.14□□□□□ -1.75
XRCC1P18887 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.14□□□□□ -1.75
XRCC1P18887 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.14□□□□□ -1.75
XRCC1P18887 CBX3P2-202ENST00000583365 535 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.14□□□□□ -1.75
XRCC1P18887 OR4H6P-202ENST00000603819 340 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 AC064801.1-201ENST00000612025 407 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.14□□□□□ -1.75
XRCC1P18887 uc_338.9-201ENST00000617424 182 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 AC090506.2-201ENST00000624521 419 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.14□□□□□ -1.75
XRCC1P18887 AC008013.2-202ENST00000637965 364 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 USP9YP4-201ENST00000424401 1745 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 AC093311.1-201ENST00000506586 2021 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 AC096656.1-201ENST00000623826 1364 ntBASIC4.14□□□□□ -1.75
XRCC1P18887 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
XRCC1P18887 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
XRCC1P18887 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
XRCC1P18887 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 AL022722.2-201ENST00000402519 180 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 UBE2V1P15-201ENST00000407776 448 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 AC092647.1-201ENST00000420654 287 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC073464.3-201ENST00000422564 712 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 RWDD4P2-201ENST00000426392 563 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 MTCO1P52-201ENST00000433928 531 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.13□□□□□ -1.75
XRCC1P18887 AL691517.1-201ENST00000440833 1235 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.13□□□□□ -1.75
XRCC1P18887 EEF1A1P1-201ENST00000447052 739 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC107398.1-201ENST00000486904 505 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 RWDD4P1-201ENST00000488019 565 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.13□□□□□ -1.75
XRCC1P18887 SETP12-201ENST00000514068 805 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.13□□□□□ -1.75
XRCC1P18887 MTCO1P35-201ENST00000515270 228 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.13□□□□□ -1.75
XRCC1P18887 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC087272.1-201ENST00000523624 533 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.13□□□□□ -1.75
XRCC1P18887 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC233266.2-201ENST00000567067 528 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 RN7SL600P-201ENST00000581811 299 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC010200.2-201ENST00000605098 235 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.13□□□□□ -1.75
XRCC1P18887 AC026368.1-201ENST00000614934 690 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
XRCC1P18887 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.13□□□□□ -1.75
XRCC1P18887 ZNF90P1-201ENST00000480493 1951 ntBASIC4.13□□□□□ -1.75
XRCC1P18887 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.12□□□□□ -1.75
XRCC1P18887 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 AL133412.1-201ENST00000380194 2992 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.12□□□□□ -1.75
XRCC1P18887 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
XRCC1P18887 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.12□□□□□ -1.75
XRCC1P18887 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.12□□□□□ -1.75
XRCC1P18887 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 NDUFS5P3-201ENST00000450668 321 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms