Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 BNIP3P11-201ENST00000603878 563 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 U4.6-201ENST00000621618 127 ntBASIC6.29□□□□□ -1.4
TOP2AP11388 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.29□□□□□ -1.4
TOP2AP11388 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP2AP11388 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TOP2AP11388 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC6.29□□□□□ -1.4
TOP2AP11388 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
TOP2AP11388 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOP2AP11388 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TOP2AP11388 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC6.28□□□□□ -1.4
TOP2AP11388 RNA5SP374-201ENST00000362939 125 ntBASIC6.28□□□□□ -1.4
TOP2AP11388 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 AC073522.1-201ENST00000483312 377 ntBASIC6.28□□□□□ -1.4
TOP2AP11388 RNU6-579P-201ENST00000516879 102 ntBASIC6.28□□□□□ -1.4
TOP2AP11388 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.28□□□□□ -1.4
TOP2AP11388 MIR7851-201ENST00000610611 160 ntBASIC6.28□□□□□ -1.4
TOP2AP11388 AL732618.1-201ENST00000623251 301 ntBASIC6.28□□□□□ -1.4
TOP2AP11388 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TOP2AP11388 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TOP2AP11388 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP2AP11388 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TOP2AP11388 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TOP2AP11388 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TOP2AP11388 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TOP2AP11388 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TOP2AP11388 RNA5SP52-201ENST00000362448 134 ntBASIC6.27□□□□□ -1.41
TOP2AP11388 RN7SKP74-201ENST00000362849 309 ntBASIC6.27□□□□□ -1.41
TOP2AP11388 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.27□□□□□ -1.41
TOP2AP11388 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.27□□□□□ -1.41
TOP2AP11388 U3.44-201ENST00000458938 192 ntBASIC6.27□□□□□ -1.41
TOP2AP11388 RPL32P34-201ENST00000486380 400 ntBASIC6.27□□□□□ -1.41
TOP2AP11388 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.27□□□□□ -1.41
TOP2AP11388 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.27□□□□□ -1.41
TOP2AP11388 AL513477.2-201ENST00000607858 568 ntBASIC6.27□□□□□ -1.41
TOP2AP11388 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC6.27□□□□□ -1.41
TOP2AP11388 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TOP2AP11388 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TOP2AP11388 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 AC091862.1-201ENST00000438016 1100 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 SETP4-201ENST00000455717 868 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AC099563.1-201ENST00000456086 418 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.26□□□□□ -1.41
TOP2AP11388 FTH1P24-201ENST00000503502 462 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.26□□□□□ -1.41
TOP2AP11388 NCAPGP2-201ENST00000557911 754 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.26□□□□□ -1.41
TOP2AP11388 AC125494.3-201ENST00000602759 455 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AC243756.2-201ENST00000618406 463 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AL669942.2-201ENST00000620352 697 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 AP003355.3-201ENST00000623465 114 ntBASIC6.26□□□□□ -1.41
TOP2AP11388 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.26□□□□□ -1.41
TOP2AP11388 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TOP2AP11388 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.25□□□□□ -1.41
TOP2AP11388 RPF2P1-201ENST00000424137 906 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP2AP11388 STMN1P2-201ENST00000508435 439 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 HIGD1AP18-201ENST00000520730 278 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP2AP11388 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.25□□□□□ -1.41
TOP2AP11388 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC6.25□□□□□ -1.41
TOP2AP11388 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TOP2AP11388 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TOP2AP11388 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TOP2AP11388 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TOP2AP11388 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TOP2AP11388 OR4K6P-201ENST00000416478 897 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AJ239321.1-201ENST00000424255 564 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AC127537.2-201ENST00000439258 465 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 MTND6P6-201ENST00000478031 263 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AL049873.1-201ENST00000480540 376 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP2AP11388 TCP11X3P-202ENST00000514289 1254 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP2AP11388 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.25□□□□□ -1.41
TOP2AP11388 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.25□□□□□ -1.41
TOP2AP11388 AC093524.1-201ENST00000564266 1094 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 MRPS35P3-201ENST00000603189 709 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AL163642.2-201ENST00000604722 1019 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 OR7M1P-201ENST00000608946 533 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AC091905.1-201ENST00000624400 311 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 AC127502.3-201ENST00000636170 1206 ntBASIC6.25□□□□□ -1.41
TOP2AP11388 BDP1P-201ENST00000582658 1990 ntBASIC6.24□□□□□ -1.41
TOP2AP11388 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TOP2AP11388 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.24□□□□□ -1.41
TOP2AP11388 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TOP2AP11388 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TOP2AP11388 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
TOP2AP11388 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms