Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.38□□□□□ -1.87
FREM3P0C091 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.38□□□□□ -1.87
FREM3P0C091 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FREM3P0C091 LINC00901.1-201ENST00000617252 152 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.38□□□□□ -1.87
FREM3P0C091 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FREM3P0C091 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
FREM3P0C091 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC114814.2-201ENST00000419195 485 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 AL050321.1-201ENST00000432363 400 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.37□□□□□ -1.87
FREM3P0C091 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.37□□□□□ -1.87
FREM3P0C091 RN7SL93P-201ENST00000463035 293 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FREM3P0C091 OR10D4P-201ENST00000525892 951 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 AC107016.1-201ENST00000550463 337 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 AC023161.2-201ENST00000551218 780 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 MIR3651-201ENST00000630427 90 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.37□□□□□ -1.87
FREM3P0C091 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.37□□□□□ -1.87
FREM3P0C091 RNU1-18P-201ENST00000363062 164 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FREM3P0C091 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
FREM3P0C091 RNU2-22P-201ENST00000411266 212 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.37□□□□□ -1.87
FREM3P0C091 SNORA71B-202ENST00000439232 272 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.37□□□□□ -1.87
FREM3P0C091 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 AC069499.1-201ENST00000489433 509 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC093853.1-201ENST00000515689 483 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 RNA5SP208-201ENST00000516156 78 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FREM3P0C091 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.37□□□□□ -1.87
FREM3P0C091 AL161756.2-201ENST00000604597 246 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC244100.1-202ENST00000621554 382 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.37□□□□□ -1.87
FREM3P0C091 AC132825.8-201ENST00000640783 297 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 CASC19-284ENST00000642142 1868 ntBASIC3.37□□□□□ -1.87
FREM3P0C091 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
FREM3P0C091 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
FREM3P0C091 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
FREM3P0C091 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.36□□□□□ -1.87
FREM3P0C091 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FREM3P0C091 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FREM3P0C091 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.36□□□□□ -1.87
FREM3P0C091 AL627171.1-201ENST00000618845 1308 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FREM3P0C091 SNORA62.3-201ENST00000365110 153 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.36□□□□□ -1.87
FREM3P0C091 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.36□□□□□ -1.87
FREM3P0C091 RPL37P1-201ENST00000432310 284 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 ACTR3P3-201ENST00000480448 893 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
FREM3P0C091 RNU6-1334P-201ENST00000516032 105 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.36□□□□□ -1.87
FREM3P0C091 MIR6075-201ENST00000620782 95 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 AC244258.1-201ENST00000637553 1071 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 AC009093.8-201ENST00000641769 292 ntBASIC3.36□□□□□ -1.87
FREM3P0C091 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.36□□□□□ -1.87
FREM3P0C091 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FREM3P0C091 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FREM3P0C091 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 RPL21P11-201ENST00000461458 483 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 BTF3L4P4-201ENST00000506381 449 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 HMGN1P15-201ENST00000513870 295 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.35□□□□□ -1.87
FREM3P0C091 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
FREM3P0C091 AC133552.5-201ENST00000604266 540 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 AC243654.2-201ENST00000612843 443 ntBASIC3.35□□□□□ -1.87
FREM3P0C091 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
FREM3P0C091 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
FREM3P0C091 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FREM3P0C091 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.35□□□□□ -1.87
FREM3P0C091 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms