Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL1P09341 CEACAMP4-201ENST00000457676 421 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC092691.2-201ENST00000461787 803 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC087312.1-201ENST00000471411 480 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.96□□□□□ -1.94
CXCL1P09341 NPM1P17-201ENST00000479221 602 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 ACTG1P13-201ENST00000486987 1043 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC008958.1-201ENST00000511047 682 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.96□□□□□ -1.94
CXCL1P09341 OR7H2P-201ENST00000513483 306 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC108471.1-201ENST00000513977 287 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC099522.1-202ENST00000514718 367 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 RNA5SP49-201ENST00000516450 115 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.96□□□□□ -1.94
CXCL1P09341 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC025627.2-201ENST00000576220 160 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL1P09341 AC010857.1-201ENST00000606398 594 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 AC011816.2-201ENST00000607089 556 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CXCL1P09341 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CXCL1P09341 AL158163.1-201ENST00000603915 1649 ntBASIC2.96□□□□□ -1.94
CXCL1P09341 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CXCL1P09341 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CXCL1P09341 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL1P09341 PWAR6-201ENST00000552334 4618 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 AC058791.1-201ENST00000608412 3198 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 AC004972.1-201ENST00000623934 2209 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CXCL1P09341 RPL7AP73-201ENST00000413490 353 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 GTF3AP1-201ENST00000416942 1004 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 TRGV6-201ENST00000417928 299 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 USP9YP9-201ENST00000429406 715 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.95□□□□□ -1.94
CXCL1P09341 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CXCL1P09341 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.95□□□□□ -1.94
CXCL1P09341 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.95□□□□□ -1.94
CXCL1P09341 RPS4XP2-201ENST00000458402 793 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 RPL38P1-201ENST00000460914 211 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC006463.2-201ENST00000473326 348 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL1P09341 RN7SL629P-201ENST00000489622 285 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.95□□□□□ -1.94
CXCL1P09341 TXNP6-201ENST00000510190 310 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AP001636.2-201ENST00000525517 696 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.95□□□□□ -1.94
CXCL1P09341 MIR4458-201ENST00000578872 75 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CXCL1P09341 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.95□□□□□ -1.94
CXCL1P09341 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 KLKP1-201ENST00000595979 403 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC007620.3-201ENST00000608131 497 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 MIR7155-201ENST00000615925 56 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC016769.4-201ENST00000616893 535 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 AC016957.2-201ENST00000616998 848 ntBASIC2.95□□□□□ -1.94
CXCL1P09341 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL1P09341 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.95□□□□□ -1.94
CXCL1P09341 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL1P09341 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CXCL1P09341 RNU1-75P-201ENST00000347264 129 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 RNU6-697P-201ENST00000363348 107 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 RNU6-805P-201ENST00000365643 106 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CXCL1P09341 AL034403.1-201ENST00000399414 885 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 SPTLC1P2-201ENST00000407089 121 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL1P09341 SAGE2P-201ENST00000420011 2126 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AC048351.1-201ENST00000420064 602 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 GTF2IP23-201ENST00000423746 351 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 RPL30P3-201ENST00000424262 333 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 HIGD1AP4-201ENST00000430194 280 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL1P09341 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL1P09341 FTH1P16-201ENST00000435241 552 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 CACYBPP1-201ENST00000438592 684 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AL353093.1-201ENST00000441292 436 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL1P09341 AC125238.1-201ENST00000448842 249 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 PPIAP20-201ENST00000449839 135 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AP002884.2-201ENST00000471647 395 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms