Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TPM3P06753 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM3P06753 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
TPM3P06753 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TPM3P06753 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TPM3P06753 AL132640.2-201ENST00000559968 1698 ntBASIC4.35□□□□□ -1.71
TPM3P06753 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM3P06753 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM3P06753 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TPM3P06753 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TPM3P06753 RNU1-132P-201ENST00000364300 164 ntBASIC4.34□□□□□ -1.71
TPM3P06753 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 HSPE1P12-201ENST00000412576 301 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 RNU6-1218P-201ENST00000458990 108 ntBASIC4.34□□□□□ -1.71
TPM3P06753 RN7SL330P-201ENST00000469709 307 ntBASIC4.34□□□□□ -1.71
TPM3P06753 RN7SL860P-201ENST00000473738 223 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 AC012170.1-201ENST00000495139 359 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC010627.1-201ENST00000503819 1294 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 AC091516.1-201ENST00000549191 703 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.34□□□□□ -1.71
TPM3P06753 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 MIR3186-201ENST00000577404 85 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 AL365503.1-201ENST00000605247 905 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC019193.2-201ENST00000610012 634 ntBASIC4.34□□□□□ -1.71
TPM3P06753 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.34□□□□□ -1.71
TPM3P06753 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.34□□□□□ -1.71
TPM3P06753 MFSD8-216ENST00000641147 4009 ntBASIC4.34□□□□□ -1.71
TPM3P06753 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TPM3P06753 AC000367.1-201ENST00000452711 1766 ntBASIC4.34□□□□□ -1.71
TPM3P06753 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
TPM3P06753 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
TPM3P06753 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.34□□□□□ -1.72
TPM3P06753 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM3P06753 RIOK3P1-201ENST00000418778 1528 ntBASIC4.33□□□□□ -1.72
TPM3P06753 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TPM3P06753 OR4K17-201ENST00000315543 1032 ntBASIC4.33□□□□□ -1.72
TPM3P06753 RN7SKP103-201ENST00000363848 320 ntBASIC4.33□□□□□ -1.72
TPM3P06753 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM3P06753 AC108032.1-201ENST00000416706 207 ntBASIC4.33□□□□□ -1.72
TPM3P06753 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM3P06753 RPS12P23-201ENST00000419579 400 ntBASIC4.33□□□□□ -1.72
TPM3P06753 TRGV7-201ENST00000427089 353 ntBASIC4.33□□□□□ -1.72
TPM3P06753 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM3P06753 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.33□□□□□ -1.72
TPM3P06753 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM3P06753 AP000873.1-201ENST00000463987 400 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM3P06753 SNX5P1-201ENST00000505757 1041 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AC008638.1-201ENST00000506035 866 ntBASIC4.33□□□□□ -1.72
TPM3P06753 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM3P06753 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM3P06753 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM3P06753 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM3P06753 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM3P06753 AC110743.1-201ENST00000584870 478 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AC022146.1-201ENST00000595307 847 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AC007687.1-201ENST00000602704 304 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.33□□□□□ -1.72
TPM3P06753 PSMA6P4-201ENST00000603247 718 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AC007423.1-201ENST00000605009 627 ntBASIC4.33□□□□□ -1.72
TPM3P06753 AL592436.1-201ENST00000605135 558 ntBASIC4.33□□□□□ -1.72
TPM3P06753 U6.98-201ENST00000637157 84 ntBASIC4.33□□□□□ -1.72
TPM3P06753 MIR7153-201ENST00000637758 57 ntBASIC4.33□□□□□ -1.72
TPM3P06753 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TPM3P06753 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.33□□□□□ -1.72
TPM3P06753 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TPM3P06753 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM3P06753 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM3P06753 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM3P06753 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TPM3P06753 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
TPM3P06753 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM3P06753 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TPM3P06753 AL590806.1-201ENST00000415818 853 ntBASIC4.32□□□□□ -1.72
TPM3P06753 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM3P06753 MTCO3P21-201ENST00000430791 643 ntBASIC4.32□□□□□ -1.72
TPM3P06753 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.32□□□□□ -1.72
TPM3P06753 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms