Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MARK2P15-201ENST00000432204 2186 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 AC008725.1-201ENST00000605123 2263 ntBASIC3.12□□□□□ -1.91
HLA-DQA1P01909 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQA1P01909 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 ZNF90P1-201ENST00000480493 1951 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RNU6-252P-201ENST00000363232 107 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AL035419.1-201ENST00000397037 564 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RN7SKP100-201ENST00000411258 284 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RSU1P3-201ENST00000412878 835 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC007394.1-201ENST00000421941 531 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AL360081.1-201ENST00000428299 555 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 BRWD1P3-201ENST00000428816 390 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RPS24P8-201ENST00000431490 402 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RPL35AP28-201ENST00000459730 331 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RPL35AP15-201ENST00000468042 339 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC092324.1-201ENST00000468671 324 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 MTND4LP2-201ENST00000502312 285 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RN7SKP141-201ENST00000516167 338 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 RNU6-1231P-201ENST00000517185 103 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 CIR1P1-201ENST00000524055 1133 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC092747.2-201ENST00000545069 983 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC025918.2-201ENST00000558683 763 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 MIR4330-201ENST00000579077 105 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 MIR4270-201ENST00000581799 70 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 FAM25E-202ENST00000608562 189 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC100847.1-201ENST00000611316 481 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC009318.3-201ENST00000616916 503 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC091953.3-201ENST00000623220 236 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 AC007529.1-201ENST00000418574 2178 ntBASIC3.11□□□□□ -1.91
HLA-DQA1P01909 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQA1P01909 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 UBE3AP2-201ENST00000429033 2259 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL592437.2-201ENST00000421655 2434 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 RNA5SP175-201ENST00000364275 119 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 RNU6-98P-201ENST00000384173 107 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 ATP5F1P4-201ENST00000397288 746 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 RPL31P52-201ENST00000407532 367 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 RN7SKP106-201ENST00000410832 272 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 PGBD4P8-201ENST00000412993 562 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 FAR2P2-201ENST00000413041 594 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC127526.1-201ENST00000417526 366 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 LINC01347-201ENST00000417964 355 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL590762.4-201ENST00000425885 253 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL359265.2-201ENST00000434367 631 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL645939.1-201ENST00000453429 797 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 MTND6P6-201ENST00000478031 263 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 RPS23P1-201ENST00000491662 432 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC026726.1-201ENST00000512859 601 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 OR7H2P-201ENST00000513483 306 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms