Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC010285.3-201ENST00000511668 676 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 SNORA76.2-201ENST00000517095 137 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 AC010476.1-201ENST00000519111 851 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRTM2O43300 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRTM2O43300 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
LRRTM2O43300 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRTM2O43300 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.14□□□□□ -1.75
LRRTM2O43300 AC233266.2-201ENST00000567067 528 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 MIR4429-201ENST00000580105 73 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 AC083899.3-201ENST00000603413 594 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 AC008966.2-201ENST00000606157 453 ntBASIC4.14□□□□□ -1.75
LRRTM2O43300 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRTM2O43300 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LRRTM2O43300 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRTM2O43300 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRRTM2O43300 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
LRRTM2O43300 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LRRTM2O43300 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRTM2O43300 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 RN7SKP177-201ENST00000410567 355 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRTM2O43300 RPL36AP36-201ENST00000418616 301 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 RPS12P23-201ENST00000419579 400 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 FTH1P6-201ENST00000430768 320 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 FTH1P16-201ENST00000435241 552 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 MED6P1-201ENST00000439659 713 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AL121877.1-201ENST00000453704 622 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 RPL36AP41-201ENST00000493820 306 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC020593.1-201ENST00000507399 299 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC010468.3-201ENST00000508225 458 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 SAP18P1-201ENST00000512058 390 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 HAUS1P3-201ENST00000523909 662 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 OR4A2P-201ENST00000527276 913 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC135001.1-201ENST00000544546 283 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 PSMB7P1-201ENST00000556349 514 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRTM2O43300 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC115085.1-201ENST00000588924 229 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC010680.4-201ENST00000605334 543 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AC016542.1-201ENST00000608259 493 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AL645927.2-201ENST00000618350 349 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 AL138960.2-201ENST00000625145 535 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC138393.1-206ENST00000540997 1886 ntBASIC4.13□□□□□ -1.75
LRRTM2O43300 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRRTM2O43300 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.13□□□□□ -1.75
LRRTM2O43300 AC006042.3-201ENST00000454684 1469 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.12□□□□□ -1.75
LRRTM2O43300 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRRTM2O43300 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.12□□□□□ -1.75
LRRTM2O43300 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.12□□□□□ -1.75
LRRTM2O43300 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRRTM2O43300 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRRTM2O43300 MIR448-201ENST00000362131 111 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
LRRTM2O43300 RNU6-1176P-201ENST00000390955 107 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 AL160275.2-201ENST00000412010 394 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 RPL21P91-201ENST00000429231 479 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 ACTR3P2-201ENST00000439585 1257 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.12□□□□□ -1.75
LRRTM2O43300 YWHAZP2-201ENST00000440317 728 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 PHBP16-201ENST00000446318 950 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.12□□□□□ -1.75
LRRTM2O43300 RPS27AP15-201ENST00000447672 466 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 AC108463.1-201ENST00000450258 347 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.12□□□□□ -1.75
LRRTM2O43300 AC022034.3-201ENST00000471393 478 ntBASIC4.12□□□□□ -1.75
LRRTM2O43300 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms