Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AL589826.1-201ENST00000340697 249 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 RNU1-87P-201ENST00000363727 170 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 RNU6-146P-201ENST00000384602 108 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 GSTA12P-201ENST00000402398 508 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC016397.1-201ENST00000412463 242 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 CHIAP3-201ENST00000423668 1133 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 CR848007.2-201ENST00000424918 787 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 VDAC1P6-201ENST00000430062 855 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 COX6B1P7-201ENST00000430845 235 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AL627224.1-201ENST00000448334 444 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 RPL36AP13-201ENST00000457490 317 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC109327.1-201ENST00000471666 403 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AL034351.1-201ENST00000605288 668 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC003001.2-201ENST00000616294 831 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AL445567.2-201ENST00000618935 498 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC067852.7-201ENST00000623270 535 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC009229.4-201ENST00000623854 1947 ntBASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.75□□□□□ -1.81
TRAPPC4Q9Y296 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 ERCC6-202ENST00000374127 1782 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 RNA5SP443-201ENST00000363083 132 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 RPL23AP38-201ENST00000423801 469 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AC245517.2-201ENST00000442890 346 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 EXTL2P1-201ENST00000446218 416 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 NUTF2P3-201ENST00000448540 384 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 NDUFS5P3-201ENST00000450668 321 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 RPL5P13-201ENST00000462840 709 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 RPS23P7-201ENST00000466210 444 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 RPL7P1-201ENST00000468161 747 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 RPL7P9-201ENST00000468715 747 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 DEFB109D-201ENST00000529497 240 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AL133247.2-201ENST00000603236 482 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AL445423.1-201ENST00000609941 536 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AC005962.2-201ENST00000611427 652 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 MLECP1-201ENST00000615893 709 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AL162233.1-201ENST00000620014 944 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 AC095038.2-201ENST00000621464 1070 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 MIR6715B-201ENST00000637172 77 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 LARP1BP1-201ENST00000506036 1359 ntBASIC3.74□□□□□ -1.81
TRAPPC4Q9Y296 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.73□□□□□ -1.81
TRAPPC4Q9Y296 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms