Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 PDSS1P2-201ENST00000449397 678 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 AP001033.2-201ENST00000609701 1003 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 AC084824.5-201ENST00000612009 413 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 AP004607.9-201ENST00000618202 316 ntBASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.93□□□□□ -1.14
SHROOM4Q9ULL8 TCP1P3-201ENST00000414406 1498 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 PDSS1P1-201ENST00000422953 1114 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 TBCAP1-201ENST00000436520 327 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 RPS26P2-201ENST00000440331 348 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 CASP3P1-201ENST00000446037 609 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 RPL7P48-201ENST00000461513 746 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 AC006064.5-201ENST00000541782 248 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 ZNF92P2-201ENST00000600543 1059 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 AL442067.2-201ENST00000614033 363 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 PCAT14-202ENST00000627127 3935 ntBASIC7.92□□□□□ -1.14
SHROOM4Q9ULL8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AC024560.2-201ENST00000507981 1497 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 RNU2-17P-201ENST00000410290 190 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 RPL23AP25-201ENST00000430973 463 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 RPS29P19-201ENST00000479709 171 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 RNU6-1102P-201ENST00000516149 96 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 HAUS1P3-201ENST00000523909 662 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AC120057.2-201ENST00000571520 271 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AL121890.2-201ENST00000617644 465 ntBASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM4Q9ULL8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AC016588.2-201ENST00000632484 3021 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 OR4A15-201ENST00000314706 1035 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 OR6K3-202ENST00000368146 996 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 RNU4-6P-201ENST00000410804 122 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 RNU4-74P-201ENST00000411280 161 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 Z92545.1-201ENST00000411782 234 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 RPL23AP46-201ENST00000438548 490 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AL451050.1-201ENST00000450126 415 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 RPL23AP81-201ENST00000455252 467 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 RPL21P6-201ENST00000479171 504 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 RPL23AP73-201ENST00000492507 471 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AC025459.1-201ENST00000504072 156 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 SNORA70.24-201ENST00000517233 118 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AL159169.3-201ENST00000608871 561 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AL512506.1-201ENST00000613918 449 ntBASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM4Q9ULL8 AC083837.1-201ENST00000565297 2994 ntBASIC7.9□□□□□ -1.15
SHROOM4Q9ULL8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHROOM4Q9ULL8 AL356274.2-201ENST00000624379 3752 ntBASIC7.9□□□□□ -1.15
SHROOM4Q9ULL8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHROOM4Q9ULL8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHROOM4Q9ULL8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 FO393419.3-201ENST00000428741 282 ntBASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 VN1R32P-201ENST00000452234 905 ntBASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.89□□□□□ -1.15
SHROOM4Q9ULL8 AC022884.3-201ENST00000579571 248 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms