Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 SKP1P3-201ENST00000429280 487 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 KCTD10P1-201ENST00000434203 625 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AL691517.1-201ENST00000440833 1235 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 MTCO3P43-201ENST00000440974 771 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AL500527.1-201ENST00000448532 255 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 MTND2P25-201ENST00000449028 610 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 HMGB1P5-202ENST00000451497 985 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 RPL36AP13-201ENST00000457490 317 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 RNU6-1218P-201ENST00000458990 108 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 CABYRP1-201ENST00000465493 1045 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 RPL5P30-201ENST00000465511 891 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC107398.1-201ENST00000486904 505 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 HPRT1P2-201ENST00000505250 544 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC063950.1-201ENST00000552036 308 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 NPM1P47-201ENST00000560843 856 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AGGF1P6-201ENST00000569213 976 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC040174.2-201ENST00000602701 465 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC110792.4-201ENST00000609843 298 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC025016.1-201ENST00000616746 682 ntBASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCF1Q9UBD9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 MTND4P21-201ENST00000453886 1357 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 CASC19-261ENST00000641853 1638 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 ERCC6-202ENST00000374127 1782 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 RAD1P1-201ENST00000231383 813 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 SNORA37-201ENST00000384504 129 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 LAP3P1-201ENST00000403648 294 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AL512430.2-201ENST00000406786 339 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 RPS23P10-201ENST00000416185 486 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AL590609.2-201ENST00000421430 368 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 IPMKP1-201ENST00000425988 855 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC092013.1-201ENST00000438795 332 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC069285.2-201ENST00000440210 275 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 RPL34P26-201ENST00000445636 354 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 RPL7P48-201ENST00000461513 746 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 RPL7P1-201ENST00000468161 747 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 RPL7P9-201ENST00000468715 747 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 UBA52P3-201ENST00000491303 382 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC010627.1-201ENST00000503819 1294 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 FTH1P21-201ENST00000512179 511 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 CKS1BP1-201ENST00000555221 240 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC106785.1-201ENST00000565935 262 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 MIR5684-201ENST00000585074 65 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC093227.2-201ENST00000589357 285 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 SUMO2P14-201ENST00000604488 293 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AL109618.2-201ENST00000605527 211 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 AC099676.1-201ENST00000608886 657 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 HPVC1-201ENST00000629899 1198 ntBASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCF1Q9UBD9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms