Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 AC127502.3-201ENST00000636170 1206 ntBASIC3.73□□□□□ -1.81
CHD7Q9P2D1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CHD7Q9P2D1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 HMGB3P9-201ENST00000441799 583 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AL031584.1-201ENST00000447169 754 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AL121594.4-201ENST00000556211 1196 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC124312.4-201ENST00000605533 310 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC069209.1-201ENST00000619282 651 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC119744.1-201ENST00000454746 1715 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC128716.1-201ENST00000475129 166 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AL133247.2-201ENST00000603236 482 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 RNVU1-4-201ENST00000612985 164 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AL773545.4-201ENST00000637262 310 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AL513478.4-201ENST00000641636 310 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 ARF4P3-201ENST00000397387 509 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 OOSP1P1-201ENST00000423265 274 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC107083.1-201ENST00000439643 279 ntBASIC3.72□□□□□ -1.81
CHD7Q9P2D1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.72□□□□□ -1.81
CHD7Q9P2D1 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CHD7Q9P2D1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CHD7Q9P2D1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 STMN1P2-201ENST00000508435 439 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 AP003355.3-201ENST00000623465 114 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 AC011503.2-201ENST00000594230 1500 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 SNORA3C-201ENST00000408792 125 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 SDCBPP2-201ENST00000424643 885 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 AL035458.1-201ENST00000433096 585 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 OR4A12P-201ENST00000530847 918 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 MIR3162-201ENST00000581818 82 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 AL356274.2-201ENST00000624379 3752 ntBASIC3.71□□□□□ -1.82
CHD7Q9P2D1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHD7Q9P2D1 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 U3.19-201ENST00000390893 196 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 RPL7P59-201ENST00000447700 943 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AC109925.1-201ENST00000478069 331 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AP000255.1-201ENST00000610276 676 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AL157762.1-201ENST00000619612 415 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 SNORA48.8-201ENST00000391324 134 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 RPL7P38-201ENST00000488396 739 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 UBA52P3-201ENST00000491303 382 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AC007529.1-201ENST00000418574 2178 ntBASIC3.7□□□□□ -1.82
CHD7Q9P2D1 SAGE2P-201ENST00000420011 2126 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms