Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 IFNNP1-201ENST00000429219 553 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 HIGD1AP4-201ENST00000430194 280 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 PAICSP4-201ENST00000517543 1253 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AL391497.1-201ENST00000608671 547 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AF001550.2-201ENST00000636643 217 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC073073.2-201ENST00000609827 2578 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 SNORA71.3-201ENST00000362582 128 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 BX119904.1-201ENST00000432026 348 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AL356535.1-201ENST00000440335 398 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AL645927.2-201ENST00000618350 349 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 GCNT6-201ENST00000379591 934 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AL035246.1-201ENST00000433554 1255 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AF228730.2-201ENST00000438784 848 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC133473.1-201ENST00000455173 299 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 RN7SL93P-201ENST00000463035 293 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 UBA52P3-201ENST00000491303 382 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 CDH12P2-201ENST00000504393 298 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC006499.5-201ENST00000505037 514 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 SUMO2P20-201ENST00000520803 283 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 OR8I1P-201ENST00000529291 931 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC019176.2-201ENST00000611579 315 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 CR392039.5-201ENST00000623201 510 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC004777.1-201ENST00000624317 287 ntBASIC3.63□□□□□ -1.83
CCDC88CQ9P219 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC88CQ9P219 AC006042.3-201ENST00000454684 1469 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 MIR490-201ENST00000384865 128 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AL645931.1-201ENST00000439737 410 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC135999.1-201ENST00000478962 479 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC025627.2-201ENST00000576220 160 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 RMST_9.1-201ENST00000619945 193 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC244100.1-202ENST00000621554 382 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC243312.2-201ENST00000623340 601 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
CCDC88CQ9P219 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC88CQ9P219 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 RPL17P50-201ENST00000396131 546 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC091286.1-201ENST00000431233 461 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC013410.1-201ENST00000436223 1232 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AL450263.2-201ENST00000439400 589 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AL358232.1-201ENST00000448030 501 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC092691.2-201ENST00000461787 803 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 DUXAP2-201ENST00000519198 589 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 OR5AP1P-201ENST00000529730 940 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AL390816.3-201ENST00000604527 1066 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC084757.4-201ENST00000616350 526 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms