Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 RNU6-560P-201ENST00000364007 108 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC093719.1-202ENST00000392735 373 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 RAB28P1-201ENST00000411517 641 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 OR51A3P-201ENST00000413596 924 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 UQCRBP1-201ENST00000421129 336 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 DPRXP1-201ENST00000426312 460 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 DYNLL1P7-201ENST00000429273 258 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 PPIAP13-201ENST00000434706 478 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 USP9YP22-201ENST00000438971 294 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 Z83846.1-201ENST00000446798 265 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 ANKRD26P4-201ENST00000455755 950 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 NDUFA5P9-201ENST00000472609 340 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 RPL7AP10-201ENST00000481016 791 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC090686.1-201ENST00000481577 749 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC093755.1-201ENST00000512950 1023 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 RPS27AP18-201ENST00000515536 459 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 FABP5P12-201ENST00000515543 389 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 RNA5SP230-201ENST00000517039 122 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 NBEAP1-201ENST00000554452 979 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC084783.1-201ENST00000565846 910 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC008782.1-201ENST00000603386 430 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC069545.1-201ENST00000605671 358 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC015804.1-201ENST00000622935 435 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 AC138965.3-201ENST00000623875 498 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 AL049536.1-201ENST00000625043 744 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 BX005019.1-201ENST00000561881 1810 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 DDX18P5-201ENST00000534547 1306 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL20A1Q9P218 RPL32P3-201ENST00000359025 275 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC068538.1-201ENST00000376856 336 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 FABP12P1-201ENST00000401911 322 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC234782.4-201ENST00000417646 1048 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC007435.1-201ENST00000421086 415 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 REREP1Y-201ENST00000422655 198 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 EIF4HP2-201ENST00000424380 563 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC091390.1-201ENST00000433904 331 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 RPL12P18-201ENST00000437175 325 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 COX7BP2-201ENST00000437976 242 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 PPIAP17-201ENST00000438507 471 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AL008629.1-201ENST00000438615 184 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 REREP2Y-201ENST00000439103 200 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 SETD6P1-201ENST00000444575 317 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 VPS26AP1-201ENST00000483197 979 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC026979.1-201ENST00000492525 396 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 TCP11X3P-202ENST00000514289 1254 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 OSBPL9P5-201ENST00000542581 171 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC010198.2-201ENST00000550612 259 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC087465.1-201ENST00000560574 245 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 MIR4277-201ENST00000578298 84 ntBASIC5.3□□□□□ -1.56
COL20A1Q9P218 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.3□□□□□ -1.56
COL20A1Q9P218 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms