Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 RNU6-932P-201ENST00000391108 106 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 VN1R8P-201ENST00000407739 893 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 VTA1P1-201ENST00000414044 866 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 LINC01881-201ENST00000416103 412 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 HIGD1AP15-201ENST00000416198 280 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 CYCSP10-201ENST00000417973 294 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC092634.2-201ENST00000428146 1010 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC022022.1-201ENST00000430304 178 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AL353597.2-202ENST00000434901 373 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 CASP3P1-201ENST00000446037 609 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 EIF4A1P11-201ENST00000451239 222 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 RPL7P48-201ENST00000461513 746 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 RPL6P9-201ENST00000466502 859 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC037198.2-201ENST00000478845 733 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC023050.1-201ENST00000498198 304 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC026414.1-201ENST00000504046 698 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC113430.1-201ENST00000506872 718 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 PPBPP1-201ENST00000510807 373 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC104417.1-201ENST00000523974 751 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AP001781.1-201ENST00000530977 207 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC022882.1-201ENST00000532142 501 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC006518.2-201ENST00000542513 940 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC087897.1-201ENST00000550134 156 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC009712.1-201ENST00000564938 316 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC011472.4-201ENST00000615848 491 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AC012618.3-205ENST00000637896 1496 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 CCT8P1-201ENST00000413611 1657 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 OR4K15-201ENST00000305051 1216 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 RNU6-185P-201ENST00000384421 107 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 Y_RNA.578-201ENST00000390903 88 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 CYB5AP4-201ENST00000396692 399 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 DNAJC19P6-201ENST00000401853 280 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 RNA5SP498-201ENST00000411342 120 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC013404.1-201ENST00000413068 249 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC016769.2-201ENST00000414815 475 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC092447.3-201ENST00000426027 686 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC073335.1-201ENST00000427776 363 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 RPL23AP93-201ENST00000440847 484 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AL353093.1-201ENST00000441292 436 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AL162591.2-201ENST00000449634 317 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC007686.1-201ENST00000488511 463 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 RPL23AP72-201ENST00000492447 435 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 PRELID3BP5-201ENST00000508612 460 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 HMGB1P1-201ENST00000522557 636 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 NDUFS5P6-201ENST00000529136 295 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC137768.1-201ENST00000549998 553 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC022022.2-201ENST00000602989 360 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 LINC00901.1-201ENST00000617252 152 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 MIR7703-201ENST00000620784 77 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC138907.10-201ENST00000623708 983 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms