Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 AC092435.4-201ENST00000623012 4159 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 OR52Y1P-201ENST00000452418 828 ntBASIC5.7□□□□□ -1.5
SCAPERQ9BY12 AP001486.1-201ENST00000463339 476 ntBASIC5.7□□□□□ -1.5
SCAPERQ9BY12 RAC1P2-201ENST00000511164 579 ntBASIC5.7□□□□□ -1.5
SCAPERQ9BY12 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 YPEL5P2-201ENST00000605553 359 ntBASIC5.7□□□□□ -1.5
SCAPERQ9BY12 AC018690.1-201ENST00000608144 626 ntBASIC5.7□□□□□ -1.5
SCAPERQ9BY12 AC009237.17-201ENST00000618111 748 ntBASIC5.7□□□□□ -1.5
SCAPERQ9BY12 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.7□□□□□ -1.5
SCAPERQ9BY12 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC120036.2-201ENST00000509729 1474 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC015813.6-201ENST00000624409 5808 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 MAPRE1P3-201ENST00000435438 796 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 SEPT14P1-201ENST00000458703 648 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC090589.1-201ENST00000473109 362 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 RPL7P24-201ENST00000493052 752 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 RANP9-201ENST00000519957 271 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 HIGD1AP18-201ENST00000520730 278 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 OR10D4P-201ENST00000525892 951 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC012493.2-201ENST00000595083 291 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AL078595.2-201ENST00000605309 1780 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 AC058791.1-201ENST00000608412 3198 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 HSPD1P11-201ENST00000508643 1702 ntBASIC5.69□□□□□ -1.5
SCAPERQ9BY12 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAPERQ9BY12 SCN1A-220ENST00000641603 12506 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 ATP5JP1-201ENST00000431631 322 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 OR6C71P-201ENST00000432580 913 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 AC103843.2-201ENST00000530523 682 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 MTND6P33-201ENST00000571794 183 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 AC010591.1-201ENST00000603941 649 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 CDY3P-201ENST00000454543 1618 ntBASIC5.68□□□□□ -1.5
SCAPERQ9BY12 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAPERQ9BY12 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 RN7SL807P-201ENST00000470923 297 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 AGGF1P3-201ENST00000493675 1213 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 RPL23AP94-201ENST00000512518 302 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 MYL12AP1-201ENST00000518490 515 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 AC011816.2-201ENST00000607089 556 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 SCARNA15.3-201ENST00000626315 122 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 SCARNA4.1-201ENST00000628597 123 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 AC093591.2-201ENST00000565254 3843 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 AC139426.3-201ENST00000605648 2059 ntBASIC5.67□□□□□ -1.5
SCAPERQ9BY12 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCAPERQ9BY12 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.66□□□□□ -1.5
SCAPERQ9BY12 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCAPERQ9BY12 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCAPERQ9BY12 AC017083.1-201ENST00000428093 483 ntBASIC5.66□□□□□ -1.5
SCAPERQ9BY12 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.66□□□□□ -1.5
SCAPERQ9BY12 RPL21P110-201ENST00000433345 446 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms