Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR3913-1-201ENST00000577744 102 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC027229.1-201ENST00000583887 253 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC233280.2-201ENST00000603917 1070 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC115621.1-201ENST00000604653 858 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AL136131.3-201ENST00000607600 188 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 MIR6862-1-201ENST00000613016 70 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC024255.1-201ENST00000614376 102 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 MIR6862-2-201ENST00000614755 70 ntBASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRAIPQ9BWF2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 Y_RNA.234-201ENST00000364409 97 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RPS3AP36-201ENST00000398190 775 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AL132875.1-201ENST00000403623 949 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 EIF4A1P3-201ENST00000411521 244 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 HMGA1P8-201ENST00000414130 321 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RPS12P5-201ENST00000423449 371 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RPS27AP12-201ENST00000429552 465 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RPL7P15-201ENST00000461190 712 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 MTND1P3-201ENST00000484956 952 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 COX7A2P2-201ENST00000505291 250 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RNA5SP438-201ENST00000516561 112 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 RNU6-201P-201ENST00000517100 61 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 CYCSP22-201ENST00000517555 339 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AL391840.1-201ENST00000571144 367 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 MIR3189-201ENST00000578735 73 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 MIR4801-201ENST00000582704 82 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC096861.1-201ENST00000616652 240 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 U73479.1-201ENST00000618062 168 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AL136228.1-201ENST00000622221 319 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 SOCS5P3-201ENST00000425115 1576 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AC006484.1-201ENST00000435086 1884 ntBASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRAIPQ9BWF2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 GNG5P1-201ENST00000255500 204 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 OR9K1P-201ENST00000326513 941 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 Y_RNA.46-201ENST00000362695 102 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms