Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPS20P32-201ENST00000456044 356 ntBASIC4□□□□□ -1.77
SSX3Q99909 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4□□□□□ -1.77
SSX3Q99909 AC005412.2-201ENST00000492004 341 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC108145.1-201ENST00000503770 153 ntBASIC4□□□□□ -1.77
SSX3Q99909 GAPDHP56-201ENST00000506031 988 ntBASIC4□□□□□ -1.77
SSX3Q99909 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4□□□□□ -1.77
SSX3Q99909 IGHV3-32-201ENST00000519182 355 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC104115.2-201ENST00000523026 687 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC012339.2-201ENST00000523996 453 ntBASIC4□□□□□ -1.77
SSX3Q99909 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4□□□□□ -1.77
SSX3Q99909 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4□□□□□ -1.77
SSX3Q99909 AC007424.1-203ENST00000554613 687 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4□□□□□ -1.77
SSX3Q99909 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4□□□□□ -1.77
SSX3Q99909 MIR4700-201ENST00000578311 74 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC126365.2-201ENST00000580630 379 ntBASIC4□□□□□ -1.77
SSX3Q99909 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 AC068620.3-201ENST00000602749 560 ntBASIC4□□□□□ -1.77
SSX3Q99909 BNIP3P4-201ENST00000604946 565 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC005156.1-201ENST00000613371 573 ntBASIC4□□□□□ -1.77
SSX3Q99909 AC018926.3-201ENST00000618841 406 ntBASIC4□□□□□ -1.77
SSX3Q99909 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 ECM1P2-201ENST00000503354 1577 ntBASIC4□□□□□ -1.77
SSX3Q99909 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX3Q99909 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 CASC19-206ENST00000641028 1430 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AL512646.1-201ENST00000269395 1077 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SSX3Q99909 SNORA51.12-201ENST00000384448 134 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 VN1R37P-201ENST00000419096 748 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX3Q99909 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX3Q99909 OR51AB1P-201ENST00000429046 620 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 CKS1BP5-201ENST00000434172 273 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 YWHAZP8-201ENST00000436935 731 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 RPL7P28-201ENST00000437739 740 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 AC005002.1-201ENST00000447458 540 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC233982.1-201ENST00000451247 436 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC063943.1-201ENST00000465434 453 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC006967.1-201ENST00000467608 589 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC105233.1-201ENST00000498840 781 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC025445.1-201ENST00000502728 300 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 MTND3P3-201ENST00000505004 126 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.99□□□□□ -1.77
SSX3Q99909 MRPS33P2-201ENST00000507850 322 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC007016.1-201ENST00000512110 244 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 FTH1P9-201ENST00000513251 355 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 CDH12P4-201ENST00000517835 295 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 CDH12P3-201ENST00000517935 295 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 CDH12P1-201ENST00000518435 295 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 OR5M2P-201ENST00000529003 936 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC005868.1-201ENST00000536421 331 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 GCSHP4-201ENST00000538792 439 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 RFPL1S-203ENST00000539579 330 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 CYB5AP5-201ENST00000549779 389 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC074029.1-201ENST00000552531 1044 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 AC116553.2-201ENST00000564203 463 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 BGLT3-201ENST00000564523 994 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC133794.1-201ENST00000602731 914 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC091979.2-201ENST00000607514 214 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AL713922.2-201ENST00000619384 716 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC103798.2-201ENST00000624292 632 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 MIR4496-201ENST00000635896 61 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AL590396.4-201ENST00000636779 956 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC006927.2-201ENST00000639256 389 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms