Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 FRG1CP-201ENST00000358464 769 ntBASIC3.52□□□□□ -1.85
VPS13AQ96RL7 AC000041.1-201ENST00000439655 175 ntBASIC3.52□□□□□ -1.85
VPS13AQ96RL7 RPL7P48-201ENST00000461513 746 ntBASIC3.52□□□□□ -1.85
VPS13AQ96RL7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 AL049781.1-201ENST00000623195 3585 ntBASIC3.52□□□□□ -1.85
VPS13AQ96RL7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS13AQ96RL7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 LIPT1P1-201ENST00000415870 1186 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AL513175.1-201ENST00000431492 780 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 SETP5-201ENST00000437270 562 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 DEFB109A-201ENST00000482450 265 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 OR5J1P-201ENST00000313544 939 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 RPL5P12-201ENST00000477071 851 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AL121839.2-201ENST00000565058 6943 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AP003122.5-201ENST00000527668 3766 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AC105272.1-201ENST00000438604 198 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 RNVU1-4-201ENST00000612985 164 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AC234782.5-201ENST00000617723 324 ntBASIC3.51□□□□□ -1.85
VPS13AQ96RL7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VPS13AQ96RL7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC003985.2-201ENST00000562268 1669 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 BX276092.4-201ENST00000452056 248 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AL024507.1-201ENST00000412741 274 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 UBTFL3-201ENST00000418934 1024 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 OR6K4P-201ENST00000423179 955 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 FTH1P1-201ENST00000437933 532 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 UBTFL6-201ENST00000477929 1024 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC135001.1-201ENST00000544546 283 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC127024.5-201ENST00000580085 462 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 PCA3_2.1-201ENST00000612507 409 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AL732618.1-201ENST00000623251 301 ntBASIC3.5□□□□□ -1.85
VPS13AQ96RL7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13AQ96RL7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 AC004656.1-201ENST00000568479 4951 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 AL645937.1-201ENST00000641739 1652 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 U3.19-201ENST00000390893 196 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 RPS4XP8-201ENST00000402039 771 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 OR1AA1P-201ENST00000419597 916 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 PRELID3BP10-201ENST00000431957 584 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 AC008885.1-201ENST00000514930 301 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 AC022968.1-201ENST00000567372 442 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 MIR7111-201ENST00000619751 72 ntBASIC3.49□□□□□ -1.85
VPS13AQ96RL7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13AQ96RL7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms