Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL450263.2-201ENST00000439400 589 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AL390119.1-201ENST00000440329 312 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC019185.1-201ENST00000442718 389 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 SPRYD7P1-201ENST00000443861 570 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC105399.1-202ENST00000447303 205 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 BTF3P6-201ENST00000448054 499 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 RPL7P1-201ENST00000468161 747 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 RPL7P9-201ENST00000468715 747 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 RNU6-1225P-201ENST00000516336 65 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 RNU6-678P-201ENST00000516832 109 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 RN7SKP283-201ENST00000517197 270 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 COX6B1P6-201ENST00000522347 255 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 GTF2IP8-201ENST00000560687 584 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC073544.2-201ENST00000601155 540 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AL390838.2-201ENST00000602394 274 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 NTAN1P1-201ENST00000603150 646 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 SNORD91B-202ENST00000608459 222 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC074140.1-201ENST00000621617 208 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 AC092184.1-201ENST00000625042 715 ntBASIC4.79□□□□□ -1.64
SNX18Q96RF0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX18Q96RF0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX18Q96RF0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL022322.2-201ENST00000624072 20397 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC119744.1-201ENST00000454746 1715 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 RNU6-253P-201ENST00000384730 105 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 MIR217-201ENST00000384817 110 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL161909.1-201ENST00000397390 712 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 RN7SKP273-201ENST00000411392 314 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL390774.1-201ENST00000411924 246 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AP000534.2-201ENST00000412729 568 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 SRSF1P1-201ENST00000424058 520 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 Z93242.1-201ENST00000427102 353 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 MTCO3P21-201ENST00000430791 643 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 CFL1P1-202ENST00000432948 411 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL590103.1-201ENST00000434488 307 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC015724.1-201ENST00000478577 156 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 RN7SL814P-201ENST00000487715 300 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC048346.1-201ENST00000510247 144 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC109471.1-201ENST00000511631 612 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC091965.2-201ENST00000512324 613 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 HIGD1AP10-201ENST00000527837 282 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC007954.1-201ENST00000554198 494 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms