Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 OR56B2P-202ENST00000641377 2453 ntBASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM5Q96HC4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 PRRC2CP1-201ENST00000404428 159 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 SNORA11C-201ENST00000408532 129 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 RNU4-27P-201ENST00000410889 139 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AL158050.1-201ENST00000416077 457 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 RN7SL610P-201ENST00000463845 291 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 RPS26P28-201ENST00000470806 348 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 SETP6-201ENST00000479329 568 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 CAB39P1-201ENST00000502277 460 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 OR51K1P-201ENST00000510214 950 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 MTND6P33-201ENST00000571794 183 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AP001160.4-201ENST00000596971 382 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC083899.3-201ENST00000603413 594 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC079587.1-201ENST00000603846 277 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC011458.1-201ENST00000604034 617 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AL160290.3-201ENST00000604869 165 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 Z98200.1-201ENST00000607298 470 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC015813.4-201ENST00000610469 179 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AL161616.1-201ENST00000611867 286 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC009237.17-201ENST00000618111 748 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC022306.3-201ENST00000619930 550 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 MIR4496-201ENST00000635896 61 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 Z98755.1-201ENST00000407015 1384 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 AL592494.2-201ENST00000425455 1548 ntBASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PDLIM5Q96HC4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDLIM5Q96HC4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PDLIM5Q96HC4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.34□□□□□ -1.72
PDLIM5Q96HC4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AL592148.3-201ENST00000608771 2646 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 OR10J6P-201ENST00000289731 930 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 MIR153-1-201ENST00000384914 90 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 MIR708-201ENST00000390708 88 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 GTF2IP2-201ENST00000424290 697 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC073335.1-201ENST00000427776 363 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AL132765.1-201ENST00000434165 553 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC009263.1-201ENST00000441193 1239 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 RPL7P33-201ENST00000444159 742 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 EIF2S2P2-201ENST00000447161 982 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 PPIAP3-201ENST00000450588 505 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 RPS27AP17-201ENST00000463344 455 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 RN7SL812P-201ENST00000493791 279 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AC091488.1-201ENST00000604239 660 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms