Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 RNA5SP52-201ENST00000362448 134 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 RNU4-23P-201ENST00000362839 140 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 RNU6-618P-201ENST00000363518 112 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 MIR1193-201ENST00000408109 78 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 RAC1P3-201ENST00000416129 580 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 OR8F1P-201ENST00000425243 930 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 TBCAP1-201ENST00000436520 327 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC069285.2-201ENST00000440210 275 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 Z99127.2-201ENST00000441426 334 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 HMGB3P21-201ENST00000452483 547 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC010469.1-201ENST00000463864 576 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 YPEL5P3-201ENST00000547227 352 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC069240.1-201ENST00000548774 375 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC091516.1-201ENST00000549191 703 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC084824.1-201ENST00000550917 1005 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 EIF1AXP2-201ENST00000555940 413 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC068020.1-201ENST00000594215 661 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AL451044.1-201ENST00000604867 238 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AL096803.3-201ENST00000609032 532 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC019080.5-201ENST00000624891 757 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 AC011266.1-201ENST00000624119 3569 ntBASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 RN7SKP44-201ENST00000363602 316 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 SNORA57.1-201ENST00000391227 145 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 RNU4-6P-201ENST00000410804 122 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AL691449.1-201ENST00000426570 421 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 VDAC1P6-201ENST00000430062 855 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 MTCO1P54-201ENST00000430139 712 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 ARL5AP3-201ENST00000439327 386 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 RPL7P31-201ENST00000450192 724 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC067904.2-201ENST00000517322 1283 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 IGKV2-38-201ENST00000517443 247 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 VN1R85P-201ENST00000601587 426 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC010680.3-201ENST00000604215 520 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC015813.4-201ENST00000610469 179 ntBASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECHDC3Q96DC8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 RNA5SP399-201ENST00000364003 117 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 RN7SKP280-201ENST00000364196 304 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 RNU6-564P-201ENST00000410983 104 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC083863.1-201ENST00000438811 231 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms