Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC125612.1-201ENST00000547580 377 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 NPM1P47-201ENST00000560843 856 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 MIR3915-201ENST00000578518 97 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC090312.2-201ENST00000582687 378 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC006272.2-201ENST00000594725 163 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC064872.1-201ENST00000604823 1072 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AL592221.1-201ENST00000605266 382 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC055764.2-201ENST00000610089 670 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC097505.1-201ENST00000610199 565 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC026585.1-201ENST00000619582 524 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC025263.3-201ENST00000622965 1396 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC046144.1-201ENST00000478559 1853 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 RNU6-1200P-201ENST00000384162 107 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AP000580.1-201ENST00000404439 358 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AL391361.1-201ENST00000405580 489 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 U3.36-201ENST00000408418 213 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 RN7SKP206-201ENST00000410823 293 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AL031779.1-201ENST00000415663 330 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 FABP7P2-201ENST00000429946 379 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC004938.1-201ENST00000438468 308 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 PNPLA4P1-201ENST00000458328 305 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 RN7SL172P-201ENST00000460535 303 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 RNU6-709P-201ENST00000517257 104 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 RFPL1S-203ENST00000539579 330 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC093249.4-201ENST00000564755 259 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 ACTR3BP3-201ENST00000565577 979 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 MEMO1P5-201ENST00000604810 406 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC131235.4-201ENST00000609288 620 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC008121.2-201ENST00000614647 523 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC023509.5-201ENST00000617434 807 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC007494.3-201ENST00000624660 743 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC116618.1-201ENST00000634617 774 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC087359.1-201ENST00000508335 1740 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ATG4AQ8WYN0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 DCAF13P3-201ENST00000561147 1334 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC109315.1-201ENST00000584143 1347 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RPL23P2-201ENST00000320371 421 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RNU1-83P-201ENST00000363426 164 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RNU6-619P-201ENST00000365146 108 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 OR52E6-202ENST00000379946 954 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RNU6-225P-201ENST00000384613 103 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AL590290.1-201ENST00000405336 380 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AL355379.1-201ENST00000405542 640 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RNA5SP345-201ENST00000410646 108 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms