Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RAD23BP3-201ENST00000454157 1152 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 HMGN2P7-201ENST00000456186 273 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 SNORD108-201ENST00000459332 71 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC078857.1-201ENST00000469870 667 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC025554.1-201ENST00000505641 188 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC006499.3-201ENST00000506077 748 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 ATP1B1P1-201ENST00000509767 915 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC133963.2-201ENST00000513686 578 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 Vault.1-201ENST00000516474 102 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 HMGB1P23-201ENST00000518743 568 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC092451.2-201ENST00000538746 658 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 CR383656.14-201ENST00000551951 406 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC093510.2-201ENST00000562820 896 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC012146.2-201ENST00000576545 416 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 MIR1269B-201ENST00000580405 75 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AP001180.3-201ENST00000582221 145 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC011445.2-201ENST00000599274 173 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC244505.7-201ENST00000599675 272 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AL136370.1-201ENST00000608166 691 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AP001033.2-201ENST00000609701 1003 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC097460.3-201ENST00000623099 442 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AP002371.2-201ENST00000624450 503 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 CR392039.4-201ENST00000624968 501 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 ATE1-AS1-202ENST00000636460 506 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC092162.3-201ENST00000624511 1624 ntBASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71LQ8N9Z2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AL590240.1-201ENST00000334118 313 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 ATP5F1P6-201ENST00000402768 767 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 PNRC2P1-201ENST00000423940 420 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 CEACAMP7-201ENST00000444105 496 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC063943.1-201ENST00000465434 453 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 RPSAP50-201ENST00000481955 852 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC093763.2-201ENST00000505334 1223 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 SNX5P1-201ENST00000505757 1041 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 IGKV3D-34-201ENST00000522638 302 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC113192.3-201ENST00000529152 742 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC016180.1-201ENST00000567945 403 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 RN7SL753P-201ENST00000581238 290 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC015911.5-201ENST00000587076 451 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC067852.4-201ENST00000590314 478 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 AC079880.2-201ENST00000603790 1213 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.57□□□□□ -1.84
CCDC71LQ8N9Z2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms